Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB3BP20337 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3BP20337 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3BP20337 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB3BP20337 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB3BP20337 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB3BP20337 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3BP20337 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3BP20337 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RAB3BP20337 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB3BP20337 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RAB3BP20337 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB3BP20337 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RAB3BP20337 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 AC007613.1-201ENST00000572811 2597 ntBASIC17.25■□□□□ 0.35
RAB3BP20337 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 CCDC92B-201ENST00000575506 885 ntBASIC17.25■□□□□ 0.35
RAB3BP20337 AL356652.1-201ENST00000615962 565 ntBASIC17.25■□□□□ 0.35
RAB3BP20337 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB3BP20337 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB3BP20337 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAB3BP20337 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAB3BP20337 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB3BP20337 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3BP20337 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3BP20337 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAB3BP20337 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3BP20337 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3BP20337 RBM17P2-201ENST00000616397 1405 ntBASIC17.24■□□□□ 0.35
RAB3BP20337 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB3BP20337 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3BP20337 CDV3P1-201ENST00000471403 739 ntBASIC17.24■□□□□ 0.35
RAB3BP20337 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB3BP20337 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB3BP20337 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.24■□□□□ 0.35
RAB3BP20337 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3BP20337 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB3BP20337 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB3BP20337 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3BP20337 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAB3BP20337 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3BP20337 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB3BP20337 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB3BP20337 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RAB3BP20337 AP001271.2-201ENST00000624018 1556 ntBASIC17.23■□□□□ 0.35
RAB3BP20337 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.23■□□□□ 0.35
RAB3BP20337 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RAB3BP20337 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RAB3BP20337 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB3BP20337 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAB3BP20337 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 EDA-201ENST00000338901 1233 ntBASIC17.23■□□□□ 0.35
RAB3BP20337 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3BP20337 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RAB3BP20337 AC097381.1-201ENST00000429019 1296 ntBASIC17.23■□□□□ 0.35
RAB3BP20337 PBX2P1-201ENST00000493219 1291 ntBASIC17.23■□□□□ 0.35
RAB3BP20337 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.23■□□□□ 0.35
RAB3BP20337 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.23■□□□□ 0.35
RAB3BP20337 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3BP20337 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.23■□□□□ 0.35
RAB3BP20337 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 CROCCP3-202ENST00000420820 1947 ntBASIC17.23■□□□□ 0.35
RAB3BP20337 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
RAB3BP20337 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAB3BP20337 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RAB3BP20337 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RAB3BP20337 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3BP20337 KRT16P6-202ENST00000425692 1426 ntBASIC17.22■□□□□ 0.35
RAB3BP20337 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3BP20337 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3BP20337 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB3BP20337 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms