Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.84■□□□□ 0.77
CTPS1P17812 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CTPS1P17812 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CTPS1P17812 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTPS1P17812 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CTPS1P17812 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTPS1P17812 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.83■□□□□ 0.77
CTPS1P17812 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.83■□□□□ 0.77
CTPS1P17812 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTPS1P17812 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CTPS1P17812 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTPS1P17812 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTPS1P17812 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTPS1P17812 AC239809.2-201ENST00000415381 517 ntBASIC19.83■□□□□ 0.77
CTPS1P17812 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.83■□□□□ 0.77
CTPS1P17812 RPPH1-201ENST00000516869 333 ntBASIC19.83■□□□□ 0.77
CTPS1P17812 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.83■□□□□ 0.77
CTPS1P17812 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CTPS1P17812 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.83■□□□□ 0.77
CTPS1P17812 AC142381.4-202ENST00000563973 229 ntBASIC19.83■□□□□ 0.77
CTPS1P17812 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTPS1P17812 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTPS1P17812 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.83■□□□□ 0.76
CTPS1P17812 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTPS1P17812 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTPS1P17812 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CTPS1P17812 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.82■□□□□ 0.76
CTPS1P17812 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTPS1P17812 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.82■□□□□ 0.76
CTPS1P17812 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CTPS1P17812 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTPS1P17812 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CTPS1P17812 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTPS1P17812 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.82■□□□□ 0.76
CTPS1P17812 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTPS1P17812 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.82■□□□□ 0.76
CTPS1P17812 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.82■□□□□ 0.76
CTPS1P17812 AL359736.2-201ENST00000621992 437 ntBASIC19.82■□□□□ 0.76
CTPS1P17812 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTPS1P17812 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.82■□□□□ 0.76
CTPS1P17812 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTPS1P17812 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.82■□□□□ 0.76
CTPS1P17812 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CTPS1P17812 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.82■□□□□ 0.76
CTPS1P17812 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTPS1P17812 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTPS1P17812 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTPS1P17812 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CTPS1P17812 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CTPS1P17812 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.81■□□□□ 0.76
CTPS1P17812 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.81■□□□□ 0.76
CTPS1P17812 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.81■□□□□ 0.76
CTPS1P17812 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CTPS1P17812 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.81■□□□□ 0.76
CTPS1P17812 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.81■□□□□ 0.76
CTPS1P17812 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.81■□□□□ 0.76
CTPS1P17812 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CTPS1P17812 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CTPS1P17812 FAM197Y4-202ENST00000622692 608 ntBASIC19.81■□□□□ 0.76
CTPS1P17812 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.81■□□□□ 0.76
CTPS1P17812 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.81■□□□□ 0.76
CTPS1P17812 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTPS1P17812 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.8■□□□□ 0.76
CTPS1P17812 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.8■□□□□ 0.76
CTPS1P17812 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS1P17812 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS1P17812 AP001271.2-201ENST00000624018 1556 ntBASIC19.8■□□□□ 0.76
CTPS1P17812 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS1P17812 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS1P17812 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.8■□□□□ 0.76
CTPS1P17812 GCSHP5-201ENST00000443090 522 ntBASIC19.8■□□□□ 0.76
CTPS1P17812 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.8■□□□□ 0.76
CTPS1P17812 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CTPS1P17812 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.8■□□□□ 0.76
CTPS1P17812 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.8■□□□□ 0.76
CTPS1P17812 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.8■□□□□ 0.76
CTPS1P17812 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.8■□□□□ 0.76
CTPS1P17812 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTPS1P17812 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.8■□□□□ 0.76
CTPS1P17812 AC124016.1-201ENST00000609552 612 ntBASIC19.8■□□□□ 0.76
CTPS1P17812 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CTPS1P17812 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms