Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
UBL4AP11441 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBL4AP11441 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.22■□□□□ 0.51
UBL4AP11441 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.21■□□□□ 0.51
UBL4AP11441 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.21■□□□□ 0.51
UBL4AP11441 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.21■□□□□ 0.51
UBL4AP11441 TMEM179-206ENST00000616017 1645 ntBASIC18.21■□□□□ 0.51
UBL4AP11441 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.21■□□□□ 0.51
UBL4AP11441 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.21■□□□□ 0.51
UBL4AP11441 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
UBL4AP11441 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.21■□□□□ 0.51
UBL4AP11441 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.21■□□□□ 0.51
UBL4AP11441 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.21■□□□□ 0.51
UBL4AP11441 HLA-B-256ENST00000639848 1089 ntBASIC18.21■□□□□ 0.51
UBL4AP11441 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.21■□□□□ 0.51
UBL4AP11441 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBL4AP11441 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.21■□□□□ 0.51
UBL4AP11441 AC092368.3-202ENST00000574180 1591 ntBASIC18.21■□□□□ 0.51
UBL4AP11441 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UBL4AP11441 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
UBL4AP11441 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UBL4AP11441 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
UBL4AP11441 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.2■□□□□ 0.5
UBL4AP11441 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
UBL4AP11441 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBL4AP11441 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
UBL4AP11441 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBL4AP11441 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.2■□□□□ 0.5
UBL4AP11441 PHGDH-210ENST00000641115 1638 ntBASIC18.2■□□□□ 0.5
UBL4AP11441 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 AFG3L1P-217ENST00000557444 2447 ntBASIC18.19■□□□□ 0.5
UBL4AP11441 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBL4AP11441 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBL4AP11441 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBL4AP11441 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.19■□□□□ 0.5
UBL4AP11441 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.19■□□□□ 0.5
UBL4AP11441 AC060766.5-201ENST00000590539 871 ntBASIC18.19■□□□□ 0.5
UBL4AP11441 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 AIRN-201ENST00000601203 4374 ntBASIC18.19■□□□□ 0.5
UBL4AP11441 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBL4AP11441 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBL4AP11441 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBL4AP11441 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBL4AP11441 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBL4AP11441 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.18■□□□□ 0.5
UBL4AP11441 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.18■□□□□ 0.5
UBL4AP11441 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBL4AP11441 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.18■□□□□ 0.5
UBL4AP11441 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms