Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 ESRRAP1-201ENST00000400596 1257 ntBASIC20.02■□□□□ 0.8
HLA-DQB2P05538 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 AC233263.1-201ENST00000578059 224 ntBASIC20.02■□□□□ 0.8
HLA-DQB2P05538 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.02■□□□□ 0.8
HLA-DQB2P05538 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-DQB2P05538 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DQB2P05538 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.02■□□□□ 0.79
HLA-DQB2P05538 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DQB2P05538 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 AL121829.2-201ENST00000620908 328 ntBASIC20.01■□□□□ 0.79
HLA-DQB2P05538 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQB2P05538 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HLA-DQB2P05538 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20■□□□□ 0.79
HLA-DQB2P05538 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
HLA-DQB2P05538 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20■□□□□ 0.79
HLA-DQB2P05538 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20■□□□□ 0.79
HLA-DQB2P05538 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20■□□□□ 0.79
HLA-DQB2P05538 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20■□□□□ 0.79
HLA-DQB2P05538 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 AC069544.1-201ENST00000609399 999 ntBASIC20■□□□□ 0.79
HLA-DQB2P05538 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQB2P05538 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DQB2P05538 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.98■□□□□ 0.79
HLA-DQB2P05538 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms