Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
ALDH1A1P00352 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.61■■□□□ 1.21
ALDH1A1P00352 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
ALDH1A1P00352 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ALDH1A1P00352 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ALDH1A1P00352 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
ALDH1A1P00352 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ALDH1A1P00352 AC246785.2-201ENST00000432512 513 ntBASIC22.6■■□□□ 1.21
ALDH1A1P00352 AC112907.2-201ENST00000448639 330 ntBASIC22.6■■□□□ 1.21
ALDH1A1P00352 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
ALDH1A1P00352 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
ALDH1A1P00352 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ALDH1A1P00352 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ALDH1A1P00352 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ALDH1A1P00352 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.6■■□□□ 1.21
ALDH1A1P00352 AC121338.2-201ENST00000622535 1744 ntBASIC22.6■■□□□ 1.21
ALDH1A1P00352 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
ALDH1A1P00352 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.59■■□□□ 1.21
ALDH1A1P00352 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.59■■□□□ 1.21
ALDH1A1P00352 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
ALDH1A1P00352 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
ALDH1A1P00352 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ALDH1A1P00352 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ALDH1A1P00352 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
ALDH1A1P00352 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.59■■□□□ 1.21
ALDH1A1P00352 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.59■■□□□ 1.21
ALDH1A1P00352 FDX1P1-201ENST00000449115 551 ntBASIC22.59■■□□□ 1.21
ALDH1A1P00352 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.59■■□□□ 1.21
ALDH1A1P00352 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.59■■□□□ 1.21
ALDH1A1P00352 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.59■■□□□ 1.21
ALDH1A1P00352 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
ALDH1A1P00352 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
ALDH1A1P00352 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ALDH1A1P00352 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.58■■□□□ 1.21
ALDH1A1P00352 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
ALDH1A1P00352 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
ALDH1A1P00352 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.58■■□□□ 1.21
ALDH1A1P00352 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ALDH1A1P00352 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ALDH1A1P00352 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
ALDH1A1P00352 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22.58■■□□□ 1.21
ALDH1A1P00352 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.58■■□□□ 1.21
ALDH1A1P00352 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
ALDH1A1P00352 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ALDH1A1P00352 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ALDH1A1P00352 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22.57■■□□□ 1.2
ALDH1A1P00352 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ALDH1A1P00352 Z85996.1-201ENST00000494644 937 ntBASIC22.57■■□□□ 1.2
ALDH1A1P00352 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.57■■□□□ 1.2
ALDH1A1P00352 SDHD-206ENST00000528182 754 ntTSL 3 BASIC22.57■■□□□ 1.2
ALDH1A1P00352 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.57■■□□□ 1.2
ALDH1A1P00352 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
ALDH1A1P00352 AC083849.1-201ENST00000615227 514 ntBASIC22.57■■□□□ 1.2
ALDH1A1P00352 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ALDH1A1P00352 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ALDH1A1P00352 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.57■■□□□ 1.2
ALDH1A1P00352 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ALDH1A1P00352 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
ALDH1A1P00352 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ALDH1A1P00352 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.56■■□□□ 1.2
ALDH1A1P00352 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
ALDH1A1P00352 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.56■■□□□ 1.2
ALDH1A1P00352 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ALDH1A1P00352 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.56■■□□□ 1.2
ALDH1A1P00352 RN7SL510P-201ENST00000581311 263 ntBASIC22.56■■□□□ 1.2
ALDH1A1P00352 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.56■■□□□ 1.2
ALDH1A1P00352 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
ALDH1A1P00352 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ALDH1A1P00352 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms