Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX6O95475 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX6O95475 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SIX6O95475 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.49■□□□□ 0.23
SIX6O95475 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SIX6O95475 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.49■□□□□ 0.23
SIX6O95475 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX6O95475 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.49■□□□□ 0.23
SIX6O95475 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX6O95475 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SIX6O95475 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.49■□□□□ 0.23
SIX6O95475 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX6O95475 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
SIX6O95475 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIX6O95475 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SIX6O95475 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.48■□□□□ 0.23
SIX6O95475 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SIX6O95475 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.48■□□□□ 0.23
SIX6O95475 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.48■□□□□ 0.23
SIX6O95475 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SIX6O95475 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SIX6O95475 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 AC068880.1-201ENST00000507289 2297 ntBASIC16.48■□□□□ 0.23
SIX6O95475 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SIX6O95475 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.48■□□□□ 0.23
SIX6O95475 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.48■□□□□ 0.23
SIX6O95475 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.47■□□□□ 0.23
SIX6O95475 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.47■□□□□ 0.23
SIX6O95475 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SIX6O95475 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SIX6O95475 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SIX6O95475 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SIX6O95475 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.47■□□□□ 0.23
SIX6O95475 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.47■□□□□ 0.23
SIX6O95475 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.47■□□□□ 0.23
SIX6O95475 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.47■□□□□ 0.23
SIX6O95475 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.47■□□□□ 0.23
SIX6O95475 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.47■□□□□ 0.23
SIX6O95475 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIX6O95475 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.46■□□□□ 0.23
SIX6O95475 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SIX6O95475 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.46■□□□□ 0.23
SIX6O95475 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.46■□□□□ 0.23
SIX6O95475 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.46■□□□□ 0.23
SIX6O95475 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.46■□□□□ 0.23
SIX6O95475 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.46■□□□□ 0.23
SIX6O95475 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.46■□□□□ 0.23
SIX6O95475 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.46■□□□□ 0.23
SIX6O95475 RARRES2P11-201ENST00000635158 484 ntBASIC16.46■□□□□ 0.23
SIX6O95475 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIX6O95475 AC090164.3-201ENST00000610780 2143 ntBASIC16.46■□□□□ 0.23
SIX6O95475 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms