Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRP4O75096 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.16■□□□□ 0.66
LRP4O75096 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.16■□□□□ 0.66
LRP4O75096 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRP4O75096 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRP4O75096 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.16■□□□□ 0.66
LRP4O75096 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.16■□□□□ 0.66
LRP4O75096 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
LRP4O75096 AC145285.6-201ENST00000604632 637 ntBASIC19.16■□□□□ 0.66
LRP4O75096 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRP4O75096 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRP4O75096 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRP4O75096 FSCN1P1-201ENST00000568912 1481 ntBASIC19.16■□□□□ 0.66
LRP4O75096 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.16■□□□□ 0.66
LRP4O75096 MMP23A-201ENST00000234610 1017 ntBASIC19.15■□□□□ 0.66
LRP4O75096 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRP4O75096 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.15■□□□□ 0.66
LRP4O75096 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRP4O75096 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRP4O75096 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRP4O75096 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.15■□□□□ 0.66
LRP4O75096 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRP4O75096 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRP4O75096 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRP4O75096 MIR1238-201ENST00000408483 83 ntBASIC19.15■□□□□ 0.66
LRP4O75096 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRP4O75096 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRP4O75096 AC010947.1-201ENST00000623454 693 ntBASIC19.15■□□□□ 0.66
LRP4O75096 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LRP4O75096 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRP4O75096 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.15■□□□□ 0.66
LRP4O75096 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
LRP4O75096 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRP4O75096 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LRP4O75096 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LRP4O75096 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRP4O75096 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRP4O75096 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.14■□□□□ 0.65
LRP4O75096 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.14■□□□□ 0.65
LRP4O75096 Z85996.1-201ENST00000494644 937 ntBASIC19.14■□□□□ 0.65
LRP4O75096 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.14■□□□□ 0.65
LRP4O75096 FITM1-202ENST00000559294 800 ntBASIC19.14■□□□□ 0.65
LRP4O75096 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.14■□□□□ 0.65
LRP4O75096 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRP4O75096 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRP4O75096 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.14■□□□□ 0.65
LRP4O75096 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRP4O75096 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRP4O75096 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LRP4O75096 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRP4O75096 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.13■□□□□ 0.65
LRP4O75096 KRT18P21-201ENST00000515767 1272 ntBASIC19.13■□□□□ 0.65
LRP4O75096 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRP4O75096 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRP4O75096 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LRP4O75096 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRP4O75096 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRP4O75096 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRP4O75096 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.13■□□□□ 0.65
LRP4O75096 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRP4O75096 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.13■□□□□ 0.65
LRP4O75096 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRP4O75096 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.13■□□□□ 0.65
LRP4O75096 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.13■□□□□ 0.65
LRP4O75096 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRP4O75096 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LRP4O75096 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LRP4O75096 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.13■□□□□ 0.65
LRP4O75096 AC099778.1-201ENST00000568593 1911 ntBASIC19.13■□□□□ 0.65
LRP4O75096 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRP4O75096 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRP4O75096 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
LRP4O75096 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
LRP4O75096 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.12■□□□□ 0.65
LRP4O75096 TCF3P1-201ENST00000423021 1937 ntBASIC19.12■□□□□ 0.65
LRP4O75096 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.12■□□□□ 0.65
LRP4O75096 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 SLC25A3P1-201ENST00000443844 931 ntBASIC19.12■□□□□ 0.65
LRP4O75096 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.12■□□□□ 0.65
LRP4O75096 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.12■□□□□ 0.65
LRP4O75096 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRP4O75096 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LRP4O75096 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.12■□□□□ 0.65
LRP4O75096 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.12■□□□□ 0.65
LRP4O75096 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRP4O75096 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.12■□□□□ 0.65
LRP4O75096 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.12■□□□□ 0.65
LRP4O75096 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.12■□□□□ 0.65
LRP4O75096 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
LRP4O75096 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms