Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF4O60810 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19■□□□□ 0.63
PRAMEF4O60810 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRAMEF4O60810 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRAMEF4O60810 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19■□□□□ 0.63
PRAMEF4O60810 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF4O60810 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF4O60810 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF4O60810 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF4O60810 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF4O60810 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF4O60810 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF4O60810 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF4O60810 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.99■□□□□ 0.63
PRAMEF4O60810 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRAMEF4O60810 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF4O60810 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF4O60810 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF4O60810 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRAMEF4O60810 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.98■□□□□ 0.63
PRAMEF4O60810 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.98■□□□□ 0.63
PRAMEF4O60810 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
PRAMEF4O60810 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF4O60810 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF4O60810 SOX15-203ENST00000570788 1093 ntBASIC18.98■□□□□ 0.63
PRAMEF4O60810 AC120498.8-201ENST00000614275 531 ntBASIC18.98■□□□□ 0.63
PRAMEF4O60810 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PRAMEF4O60810 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF4O60810 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF4O60810 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.98■□□□□ 0.63
PRAMEF4O60810 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF4O60810 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF4O60810 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRAMEF4O60810 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.98■□□□□ 0.63
PRAMEF4O60810 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.97■□□□□ 0.63
PRAMEF4O60810 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRAMEF4O60810 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF4O60810 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAMEF4O60810 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.96■□□□□ 0.63
PRAMEF4O60810 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.96■□□□□ 0.63
PRAMEF4O60810 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF4O60810 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.96■□□□□ 0.63
PRAMEF4O60810 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAMEF4O60810 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF4O60810 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF4O60810 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.96■□□□□ 0.63
PRAMEF4O60810 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF4O60810 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.96■□□□□ 0.63
PRAMEF4O60810 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.96■□□□□ 0.63
PRAMEF4O60810 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF4O60810 Z82202.1-201ENST00000623446 1880 ntBASIC18.96■□□□□ 0.63
PRAMEF4O60810 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF4O60810 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRAMEF4O60810 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRAMEF4O60810 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.95■□□□□ 0.62
PRAMEF4O60810 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
PRAMEF4O60810 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PRAMEF4O60810 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.95■□□□□ 0.62
PRAMEF4O60810 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF4O60810 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms