Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.16■□□□□ 0.66
PEX1O43933 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PEX1O43933 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PEX1O43933 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.16■□□□□ 0.66
PEX1O43933 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PEX1O43933 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX1O43933 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PEX1O43933 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PEX1O43933 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.15■□□□□ 0.66
PEX1O43933 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.15■□□□□ 0.66
PEX1O43933 TMEM179-206ENST00000616017 1645 ntBASIC19.15■□□□□ 0.66
PEX1O43933 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 CYP2T1P-201ENST00000432607 1285 ntBASIC19.15■□□□□ 0.66
PEX1O43933 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.15■□□□□ 0.66
PEX1O43933 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.15■□□□□ 0.66
PEX1O43933 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.15■□□□□ 0.66
PEX1O43933 AC142086.2-201ENST00000569753 217 ntBASIC19.15■□□□□ 0.66
PEX1O43933 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.15■□□□□ 0.66
PEX1O43933 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
PEX1O43933 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.15■□□□□ 0.66
PEX1O43933 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.15■□□□□ 0.66
PEX1O43933 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.15■□□□□ 0.66
PEX1O43933 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.15■□□□□ 0.66
PEX1O43933 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PEX1O43933 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PEX1O43933 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PEX1O43933 AL138781.2-201ENST00000617896 1843 ntBASIC19.14■□□□□ 0.65
PEX1O43933 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.14■□□□□ 0.65
PEX1O43933 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX1O43933 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX1O43933 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.14■□□□□ 0.65
PEX1O43933 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.14■□□□□ 0.65
PEX1O43933 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.14■□□□□ 0.65
PEX1O43933 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.14■□□□□ 0.65
PEX1O43933 AC008694.1-202ENST00000636953 945 ntBASIC19.14■□□□□ 0.65
PEX1O43933 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX1O43933 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.14■□□□□ 0.65
PEX1O43933 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.14■□□□□ 0.65
PEX1O43933 RBM17P2-201ENST00000616397 1405 ntBASIC19.14■□□□□ 0.65
PEX1O43933 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX1O43933 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX1O43933 AC120498.9-201ENST00000339021 3867 ntBASIC19.14■□□□□ 0.65
PEX1O43933 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX1O43933 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX1O43933 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PEX1O43933 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PEX1O43933 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PEX1O43933 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PEX1O43933 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEX1O43933 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PEX1O43933 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEX1O43933 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
PEX1O43933 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.13■□□□□ 0.65
PEX1O43933 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PEX1O43933 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PEX1O43933 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEX1O43933 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PEX1O43933 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PEX1O43933 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PEX1O43933 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.13■□□□□ 0.65
PEX1O43933 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.13■□□□□ 0.65
PEX1O43933 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.13■□□□□ 0.65
PEX1O43933 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEX1O43933 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.13■□□□□ 0.65
PEX1O43933 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.13■□□□□ 0.65
PEX1O43933 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PEX1O43933 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.13■□□□□ 0.65
PEX1O43933 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.13■□□□□ 0.65
PEX1O43933 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.12■□□□□ 0.65
PEX1O43933 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.12■□□□□ 0.65
PEX1O43933 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
PEX1O43933 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PEX1O43933 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PEX1O43933 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PEX1O43933 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PEX1O43933 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.12■□□□□ 0.65
PEX1O43933 AL138781.1-201ENST00000566567 1274 ntBASIC19.12■□□□□ 0.65
PEX1O43933 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.12■□□□□ 0.65
PEX1O43933 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
PEX1O43933 AC069236.1-201ENST00000604339 616 ntBASIC19.12■□□□□ 0.65
PEX1O43933 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.12■□□□□ 0.65
PEX1O43933 OR10C1-204ENST00000622521 1039 ntBASIC19.12■□□□□ 0.65
PEX1O43933 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.12■□□□□ 0.65
PEX1O43933 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PEX1O43933 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PEX1O43933 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PEX1O43933 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PEX1O43933 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PEX1O43933 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.11■□□□□ 0.65
PEX1O43933 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.11■□□□□ 0.65
PEX1O43933 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PEX1O43933 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms