Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.05■□□□□ 0.8
KDELR3O43731 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.05■□□□□ 0.8
KDELR3O43731 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 KRT16P5-201ENST00000455284 522 ntBASIC20.05■□□□□ 0.8
KDELR3O43731 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.05■□□□□ 0.8
KDELR3O43731 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.05■□□□□ 0.8
KDELR3O43731 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.05■□□□□ 0.8
KDELR3O43731 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.05■□□□□ 0.8
KDELR3O43731 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.05■□□□□ 0.8
KDELR3O43731 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.05■□□□□ 0.8
KDELR3O43731 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.05■□□□□ 0.8
KDELR3O43731 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KDELR3O43731 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.05■□□□□ 0.8
KDELR3O43731 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KDELR3O43731 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KDELR3O43731 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.05■□□□□ 0.8
KDELR3O43731 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.04■□□□□ 0.8
KDELR3O43731 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDELR3O43731 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
KDELR3O43731 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KDELR3O43731 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDELR3O43731 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDELR3O43731 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KDELR3O43731 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.04■□□□□ 0.8
KDELR3O43731 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDELR3O43731 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.04■□□□□ 0.8
KDELR3O43731 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.04■□□□□ 0.8
KDELR3O43731 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.04■□□□□ 0.8
KDELR3O43731 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.04■□□□□ 0.8
KDELR3O43731 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KDELR3O43731 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDELR3O43731 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KDELR3O43731 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KDELR3O43731 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
KDELR3O43731 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
KDELR3O43731 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.03■□□□□ 0.8
KDELR3O43731 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
KDELR3O43731 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.03■□□□□ 0.8
KDELR3O43731 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KDELR3O43731 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
KDELR3O43731 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KDELR3O43731 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.03■□□□□ 0.8
KDELR3O43731 KRT18P16-201ENST00000510337 1294 ntBASIC20.03■□□□□ 0.8
KDELR3O43731 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.03■□□□□ 0.8
KDELR3O43731 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.03■□□□□ 0.8
KDELR3O43731 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.03■□□□□ 0.8
KDELR3O43731 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KDELR3O43731 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.03■□□□□ 0.8
KDELR3O43731 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KDELR3O43731 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDELR3O43731 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.03■□□□□ 0.8
KDELR3O43731 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.02■□□□□ 0.8
KDELR3O43731 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
KDELR3O43731 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.02■□□□□ 0.8
KDELR3O43731 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.02■□□□□ 0.8
KDELR3O43731 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.02■□□□□ 0.8
KDELR3O43731 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.02■□□□□ 0.8
KDELR3O43731 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KDELR3O43731 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.02■□□□□ 0.8
KDELR3O43731 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDELR3O43731 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KDELR3O43731 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.02■□□□□ 0.79
KDELR3O43731 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
KDELR3O43731 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KDELR3O43731 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KDELR3O43731 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.02■□□□□ 0.79
KDELR3O43731 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
KDELR3O43731 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KDELR3O43731 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KDELR3O43731 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KDELR3O43731 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.01■□□□□ 0.79
KDELR3O43731 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
KDELR3O43731 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KDELR3O43731 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KDELR3O43731 TUBB8P6-201ENST00000436895 1288 ntBASIC20.01■□□□□ 0.79
KDELR3O43731 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms