Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.6■■□□□ 1.37
FOXN1O15353 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.6■■□□□ 1.37
FOXN1O15353 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.6■■□□□ 1.37
FOXN1O15353 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN1O15353 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
FOXN1O15353 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.6■■□□□ 1.37
FOXN1O15353 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 CALM1-205ENST00000553542 877 ntTSL 5 BASIC23.59■■□□□ 1.37
FOXN1O15353 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.59■■□□□ 1.37
FOXN1O15353 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.59■■□□□ 1.37
FOXN1O15353 AC139887.4-201ENST00000607877 719 ntBASIC23.59■■□□□ 1.37
FOXN1O15353 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
FOXN1O15353 AL121956.5-201ENST00000625261 221 ntBASIC23.59■■□□□ 1.37
FOXN1O15353 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.59■■□□□ 1.37
FOXN1O15353 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.59■■□□□ 1.37
FOXN1O15353 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.59■■□□□ 1.37
FOXN1O15353 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
FOXN1O15353 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.59■■□□□ 1.37
FOXN1O15353 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
FOXN1O15353 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.58■■□□□ 1.37
FOXN1O15353 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.58■■□□□ 1.37
FOXN1O15353 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC23.58■■□□□ 1.37
FOXN1O15353 FAM207BP-201ENST00000447172 505 ntBASIC23.58■■□□□ 1.37
FOXN1O15353 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.58■■□□□ 1.37
FOXN1O15353 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.58■■□□□ 1.37
FOXN1O15353 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.58■■□□□ 1.37
FOXN1O15353 EGLN1P1-201ENST00000531623 762 ntBASIC23.58■■□□□ 1.37
FOXN1O15353 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.58■■□□□ 1.37
FOXN1O15353 C2orf69P3-201ENST00000565542 1120 ntBASIC23.58■■□□□ 1.37
FOXN1O15353 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.58■■□□□ 1.37
FOXN1O15353 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
FOXN1O15353 AL121829.2-201ENST00000620908 328 ntBASIC23.58■■□□□ 1.37
FOXN1O15353 CR392000.1-201ENST00000624770 1228 ntBASIC23.58■■□□□ 1.37
FOXN1O15353 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
FOXN1O15353 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.58■■□□□ 1.36
FOXN1O15353 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
FOXN1O15353 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.57■■□□□ 1.36
FOXN1O15353 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
FOXN1O15353 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.57■■□□□ 1.36
FOXN1O15353 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
FOXN1O15353 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
FOXN1O15353 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
FOXN1O15353 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.57■■□□□ 1.36
FOXN1O15353 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
FOXN1O15353 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.57■■□□□ 1.36
FOXN1O15353 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.57■■□□□ 1.36
FOXN1O15353 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.57■■□□□ 1.36
FOXN1O15353 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
FOXN1O15353 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.57■■□□□ 1.36
FOXN1O15353 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
FOXN1O15353 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.57■■□□□ 1.36
FOXN1O15353 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
FOXN1O15353 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FOXN1O15353 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.56■■□□□ 1.36
FOXN1O15353 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.56■■□□□ 1.36
FOXN1O15353 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FOXN1O15353 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
FOXN1O15353 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
FOXN1O15353 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXN1O15353 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXN1O15353 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXN1O15353 PLK5-205ENST00000642079 1969 ntBASIC23.55■■□□□ 1.36
FOXN1O15353 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
FOXN1O15353 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXN1O15353 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXN1O15353 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXN1O15353 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
FOXN1O15353 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
FOXN1O15353 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.55■■□□□ 1.36
FOXN1O15353 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXN1O15353 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXN1O15353 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.55■■□□□ 1.36
FOXN1O15353 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.55■■□□□ 1.36
FOXN1O15353 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
FOXN1O15353 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXN1O15353 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC23.55■■□□□ 1.36
FOXN1O15353 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
FOXN1O15353 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
FOXN1O15353 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXN1O15353 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
FOXN1O15353 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.54■■□□□ 1.36
FOXN1O15353 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXN1O15353 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXN1O15353 TSPY14P-201ENST00000303979 915 ntBASIC23.54■■□□□ 1.36
FOXN1O15353 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXN1O15353 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
FOXN1O15353 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms