Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.3■□□□□ 0.68
EIF3FO00303 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.3■□□□□ 0.68
EIF3FO00303 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.3■□□□□ 0.68
EIF3FO00303 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
EIF3FO00303 UNC93B5-201ENST00000530315 699 ntBASIC19.3■□□□□ 0.68
EIF3FO00303 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
EIF3FO00303 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.3■□□□□ 0.68
EIF3FO00303 AC008687.6-201ENST00000596318 630 ntBASIC19.3■□□□□ 0.68
EIF3FO00303 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.3■□□□□ 0.68
EIF3FO00303 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.3■□□□□ 0.68
EIF3FO00303 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
EIF3FO00303 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
EIF3FO00303 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.3■□□□□ 0.68
EIF3FO00303 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.3■□□□□ 0.68
EIF3FO00303 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.29■□□□□ 0.68
EIF3FO00303 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.29■□□□□ 0.68
EIF3FO00303 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.29■□□□□ 0.68
EIF3FO00303 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.29■□□□□ 0.68
EIF3FO00303 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.29■□□□□ 0.68
EIF3FO00303 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.29■□□□□ 0.68
EIF3FO00303 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.29■□□□□ 0.68
EIF3FO00303 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.29■□□□□ 0.68
EIF3FO00303 UNC93B4-201ENST00000505679 747 ntBASIC19.29■□□□□ 0.68
EIF3FO00303 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.29■□□□□ 0.68
EIF3FO00303 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.29■□□□□ 0.68
EIF3FO00303 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.29■□□□□ 0.68
EIF3FO00303 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.29■□□□□ 0.68
EIF3FO00303 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.29■□□□□ 0.68
EIF3FO00303 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
EIF3FO00303 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EIF3FO00303 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
EIF3FO00303 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.28■□□□□ 0.68
EIF3FO00303 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.28■□□□□ 0.68
EIF3FO00303 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.28■□□□□ 0.68
EIF3FO00303 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.28■□□□□ 0.68
EIF3FO00303 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
EIF3FO00303 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.28■□□□□ 0.68
EIF3FO00303 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.28■□□□□ 0.68
EIF3FO00303 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
EIF3FO00303 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
EIF3FO00303 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.28■□□□□ 0.68
EIF3FO00303 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
EIF3FO00303 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.28■□□□□ 0.68
EIF3FO00303 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
EIF3FO00303 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.28■□□□□ 0.68
EIF3FO00303 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
EIF3FO00303 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.28■□□□□ 0.68
EIF3FO00303 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EIF3FO00303 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
EIF3FO00303 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.27■□□□□ 0.68
EIF3FO00303 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.27■□□□□ 0.68
EIF3FO00303 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.27■□□□□ 0.68
EIF3FO00303 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.27■□□□□ 0.68
EIF3FO00303 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
EIF3FO00303 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.27■□□□□ 0.68
EIF3FO00303 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.27■□□□□ 0.68
EIF3FO00303 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
EIF3FO00303 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
EIF3FO00303 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
EIF3FO00303 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.27■□□□□ 0.68
EIF3FO00303 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
EIF3FO00303 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms