Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 PGM5P4-201ENST00000421970 445 ntBASIC13.94□□□□□ -0.18
LINC01546A6NGU7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 PRORSD1P-202ENST00000563365 2154 ntBASIC13.94□□□□□ -0.18
LINC01546A6NGU7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 AC233992.3-201ENST00000607491 485 ntBASIC13.94□□□□□ -0.18
LINC01546A6NGU7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 AL358852.1-201ENST00000623174 1268 ntBASIC13.94□□□□□ -0.18
LINC01546A6NGU7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 AC243732.1-201ENST00000612648 864 ntBASIC13.93□□□□□ -0.18
LINC01546A6NGU7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01546A6NGU7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01546A6NGU7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 AC009299.2-201ENST00000482477 511 ntBASIC13.91□□□□□ -0.18
LINC01546A6NGU7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01546A6NGU7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms