Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 RPS2P52-201ENST00000469610 820 ntBASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ID1-201ENST00000376105 1233 ntBASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.42■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.4■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms