Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
EFNB3Q15768 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EFNB3Q15768 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
EFNB3Q15768 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.41□□□□□ -1.54
EFNB3Q15768 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
EFNB3Q15768 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
EFNB3Q15768 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
EFNB3Q15768 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
EFNB3Q15768 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC104966.1-201ENST00000467010 1464 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
EFNB3Q15768 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.4□□□□□ -1.54
EFNB3Q15768 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC105235.1-201ENST00000623208 1816 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.4□□□□□ -1.54
EFNB3Q15768 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.4□□□□□ -1.54
EFNB3Q15768 FAM32BP-201ENST00000344033 333 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 RNU6-609P-201ENST00000365459 107 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 RNU6-40P-201ENST00000384254 107 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
EFNB3Q15768 GCNT1P4-201ENST00000404096 329 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 PTGES3P2-201ENST00000407942 482 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 RNA5SP115-201ENST00000411160 107 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 RN7SKP108-201ENST00000411367 328 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AL354692.1-201ENST00000423044 315 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 MTND4P24-201ENST00000424002 397 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AL354707.3-201ENST00000427308 331 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.4□□□□□ -1.54
EFNB3Q15768 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC007000.2-201ENST00000442564 487 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 RPL5P10-201ENST00000445207 894 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AL590004.3-202ENST00000445883 451 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AP002345.1-201ENST00000456493 928 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC009963.3-201ENST00000458090 486 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AP002884.1-201ENST00000479691 655 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 RPL12P30-201ENST00000488389 499 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AK4P6-201ENST00000505168 528 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.4□□□□□ -1.54
EFNB3Q15768 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.4□□□□□ -1.54
EFNB3Q15768 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
EFNB3Q15768 BNIP3P31-201ENST00000604515 566 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AC135178.6-201ENST00000605314 398 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AL080312.2-201ENST00000613001 630 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 MIR6071-201ENST00000616741 78 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC016957.2-201ENST00000616998 848 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AP006248.3-201ENST00000623580 594 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.4□□□□□ -1.54
EFNB3Q15768 AC073488.6-201ENST00000632293 754 ntBASIC5.4□□□□□ -1.54
EFNB3Q15768 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
EFNB3Q15768 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
EFNB3Q15768 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
EFNB3Q15768 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
EFNB3Q15768 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
EFNB3Q15768 MTND4P9-201ENST00000507819 1346 ntBASIC5.4□□□□□ -1.55
EFNB3Q15768 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
EFNB3Q15768 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
EFNB3Q15768 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
EFNB3Q15768 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
EFNB3Q15768 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.55
EFNB3Q15768 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
EFNB3Q15768 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms