RNA–Protein interactions for RNA: ENST00000550279.1

AC090680.2-201, humanhuman

TSL 3 BASIC

Gene AC090680.2, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090680.2-201ENST00000550279 AEBP2Q6ZN18 517 aaPredicted RBP30.57■■■□□ 2.48
AC090680.2-201ENST00000550279 CHIC1Q5VXU3 224 aa29.79■■■□□ 2.36
AC090680.2-201ENST00000550279 PHF23Q9BUL5 403 aaPredicted RBP26.18■■□□□ 1.78
AC090680.2-201ENST00000550279 SENP3Q9H4L4 574 aaPredicted RBP25.98■■□□□ 1.75
AC090680.2-201ENST00000550279 PLPPR3Q6T4P5 718 aa24.15■■□□□ 1.46
AC090680.2-201ENST00000550279 FOXD1Q16676 465 aa24.1■■□□□ 1.45
AC090680.2-201ENST00000550279 PPP6R1Q9UPN7 881 aa23.11■■□□□ 1.29
AC090680.2-201ENST00000550279 ADRA2BP18089 450 aa23.1■■□□□ 1.29
AC090680.2-201ENST00000550279 PIAS4Q8N2W9 510 aaPredicted RBP22.73■■□□□ 1.23
AC090680.2-201ENST00000550279 MSH5O43196 834 aa22.26■■□□□ 1.15
AC090680.2-201ENST00000550279 PPP4R3CPQ6ZMV5 832 aa21.27■■□□□ 1
AC090680.2-201ENST00000550279 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
AC090680.2-201ENST00000550279 SCAF1Q9H7N4 1312 aaKnown RBP21.12■□□□□ 0.97
AC090680.2-201ENST00000550279 MAPK8IP2Q13387 824 aaPredicted RBP20.96■□□□□ 0.95
AC090680.2-201ENST00000550279 DMRT2Q9Y5R5 561 aa20.72■□□□□ 0.91
AC090680.2-201ENST00000550279 KCNA4P22459 653 aa20.69■□□□□ 0.9
AC090680.2-201ENST00000550279 NCBP3Q53F19 620 aaKnown RBP20.69■□□□□ 0.9
AC090680.2-201ENST00000550279 CNKSR2Q8WXI2 1034 aa20.69■□□□□ 0.9
AC090680.2-201ENST00000550279 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
AC090680.2-201ENST00000550279 RNF216Q9NWF9 866 aaPredicted RBP20.31■□□□□ 0.84
AC090680.2-201ENST00000550279 HOXD11P31277 338 aaPredicted RBP20.25■□□□□ 0.83
AC090680.2-201ENST00000550279 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
AC090680.2-201ENST00000550279 DCAF8L1A6NGE4 600 aa19.81■□□□□ 0.76
AC090680.2-201ENST00000550279 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
AC090680.2-201ENST00000550279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.29■□□□□ 0.68
AC090680.2-201ENST00000550279 SLC4A2P04920 1241 aa19.27■□□□□ 0.68
AC090680.2-201ENST00000550279 RNF39Q9H2S5 420 aa19.07■□□□□ 0.64
AC090680.2-201ENST00000550279 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
AC090680.2-201ENST00000550279 ZBTB22O15209 634 aa19.05■□□□□ 0.64
AC090680.2-201ENST00000550279 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
AC090680.2-201ENST00000550279 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
AC090680.2-201ENST00000550279 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
AC090680.2-201ENST00000550279 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
AC090680.2-201ENST00000550279 C1QBPQ07021 282 aaKnown RBP18.83■□□□□ 0.6
AC090680.2-201ENST00000550279 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
AC090680.2-201ENST00000550279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
AC090680.2-201ENST00000550279 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
AC090680.2-201ENST00000550279 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
AC090680.2-201ENST00000550279 APLP2Q06481 763 aa18.54■□□□□ 0.56
AC090680.2-201ENST00000550279 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
AC090680.2-201ENST00000550279 ATXN8OSP0DMR3 200 aa18.41■□□□□ 0.54
AC090680.2-201ENST00000550279 CAPN15O75808 1086 aa18.4■□□□□ 0.54
AC090680.2-201ENST00000550279 ATF5Q9Y2D1 282 aaPredicted RBP18.33■□□□□ 0.52
AC090680.2-201ENST00000550279 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
AC090680.2-201ENST00000550279 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
AC090680.2-201ENST00000550279 DSG3P32926 999 aa18.11■□□□□ 0.49
AC090680.2-201ENST00000550279 ABCB7O75027 752 aa18.05■□□□□ 0.48
AC090680.2-201ENST00000550279 POLA2Q14181 598 aa17.97■□□□□ 0.47
AC090680.2-201ENST00000550279 ZBTB12Q9Y330 459 aaPredicted RBP17.7■□□□□ 0.42
AC090680.2-201ENST00000550279 FBLN2P98095 1184 aa17.59■□□□□ 0.41
AC090680.2-201ENST00000550279 MKRN4PQ13434 485 aaPredicted RBP17.55■□□□□ 0.4
AC090680.2-201ENST00000550279 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
AC090680.2-201ENST00000550279 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
AC090680.2-201ENST00000550279 SPDYE2BA6NHP3 402 aa17.21■□□□□ 0.35
AC090680.2-201ENST00000550279 SPDYE6P0CI01 402 aa17.21■□□□□ 0.35
AC090680.2-201ENST00000550279 SPDYE2Q495Y8 402 aa17.21■□□□□ 0.35
AC090680.2-201ENST00000550279 SPDYE4A6NLX3 237 aa17.11■□□□□ 0.33
AC090680.2-201ENST00000550279 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
AC090680.2-201ENST00000550279 SSUH2Q9Y2M2 353 aa17.07■□□□□ 0.32
AC090680.2-201ENST00000550279 FKBP8Q14318 412 aa17.05■□□□□ 0.32
AC090680.2-201ENST00000550279 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
AC090680.2-201ENST00000550279 PABPN1Q86U42 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
AC090680.2-201ENST00000550279 REM2Q8IYK8 340 aaPredicted RBP16.87■□□□□ 0.29
AC090680.2-201ENST00000550279 PROM2Q8N271 834 aa16.84■□□□□ 0.29
AC090680.2-201ENST00000550279 SPDYE1Q8NFV5 336 aaPredicted RBP16.72■□□□□ 0.27
AC090680.2-201ENST00000550279 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
AC090680.2-201ENST00000550279 POTEHQ6S545 545 aa16.67■□□□□ 0.26
AC090680.2-201ENST00000550279 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
AC090680.2-201ENST00000550279 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
AC090680.2-201ENST00000550279 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
AC090680.2-201ENST00000550279 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
AC090680.2-201ENST00000550279 PRR29P0C7W0 189 aa16.46■□□□□ 0.23
AC090680.2-201ENST00000550279 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
AC090680.2-201ENST00000550279 PIP4P2Q8N4L2 257 aa16.35■□□□□ 0.21
AC090680.2-201ENST00000550279 VASPP50552 380 aaPredicted RBP16.27■□□□□ 0.2
AC090680.2-201ENST00000550279 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
AC090680.2-201ENST00000550279 CREBZFQ9NS37 354 aa16.25■□□□□ 0.19
AC090680.2-201ENST00000550279 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
AC090680.2-201ENST00000550279 MIER1Q8N108 512 aa16.22■□□□□ 0.19
AC090680.2-201ENST00000550279 PLCD3Q8N3E9 789 aa16.2■□□□□ 0.18
AC090680.2-201ENST00000550279 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
AC090680.2-201ENST00000550279 FARP1Q9Y4F1 1045 aaPredicted RBP16.08■□□□□ 0.16
AC090680.2-201ENST00000550279 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
AC090680.2-201ENST00000550279 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
AC090680.2-201ENST00000550279 IFNLR1Q8IU57 520 aaPredicted RBP16.01■□□□□ 0.15
AC090680.2-201ENST00000550279 NPM1P06748 294 aaKnown RBP eCLIP15.98■□□□□ 0.15
AC090680.2-201ENST00000550279 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
AC090680.2-201ENST00000550279 SPOCK2Q92563 424 aa15.84■□□□□ 0.13
AC090680.2-201ENST00000550279 C19orf67A6NJJ6 358 aa15.83■□□□□ 0.12
AC090680.2-201ENST00000550279 HAX1O00165 279 aa15.83■□□□□ 0.12
AC090680.2-201ENST00000550279 NUBP1P53384 320 aa15.83■□□□□ 0.12
AC090680.2-201ENST00000550279 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
AC090680.2-201ENST00000550279 RASEFQ8IZ41 740 aa15.79■□□□□ 0.12
AC090680.2-201ENST00000550279 PAK3O75914 559 aaPredicted RBP15.73■□□□□ 0.11
AC090680.2-201ENST00000550279 FAM212AQ96EL1 285 aa15.72■□□□□ 0.11
AC090680.2-201ENST00000550279 TSPYL2Q9H2G4 693 aaPredicted RBP15.71■□□□□ 0.11
AC090680.2-201ENST00000550279 EVX2Q03828 476 aa15.69■□□□□ 0.1
AC090680.2-201ENST00000550279 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
AC090680.2-201ENST00000550279 DCAF8Q5TAQ9 597 aa15.65■□□□□ 0.1
AC090680.2-201ENST00000550279 SP7Q8TDD2 431 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms