Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.96□□□□□ -1.3
EPHB3P54753 AGGF1P9-201ENST00000561884 913 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.96□□□□□ -1.3
EPHB3P54753 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.96□□□□□ -1.3
EPHB3P54753 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 U1.41-201ENST00000617626 165 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 AC004232.3-201ENST00000622977 525 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 AC114546.4-201ENST00000624413 369 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 AC073593.1-201ENST00000624500 411 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 AC090582.1-201ENST00000636321 199 ntBASIC6.96□□□□□ -1.3
EPHB3P54753 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
EPHB3P54753 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.96□□□□□ -1.3
EPHB3P54753 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.96□□□□□ -1.3
EPHB3P54753 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
EPHB3P54753 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.96□□□□□ -1.3
EPHB3P54753 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 AL021877.2-201ENST00000624442 10684 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.95□□□□□ -1.3
EPHB3P54753 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 AC005839.1-201ENST00000624148 3213 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
EPHB3P54753 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
EPHB3P54753 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
EPHB3P54753 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
EPHB3P54753 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.95□□□□□ -1.3
EPHB3P54753 AL359092.1-201ENST00000417156 265 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AL356320.2-201ENST00000417263 507 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AL365396.1-201ENST00000430854 671 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.95□□□□□ -1.3
EPHB3P54753 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.95□□□□□ -1.3
EPHB3P54753 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.95□□□□□ -1.3
EPHB3P54753 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.95□□□□□ -1.3
EPHB3P54753 OR10R1P-201ENST00000441524 1141 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.95□□□□□ -1.3
EPHB3P54753 AL358794.1-201ENST00000445689 381 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 H3F3AP5-201ENST00000475267 429 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 RPL19P11-201ENST00000495944 589 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 ASNSP4-201ENST00000511103 447 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.95□□□□□ -1.3
EPHB3P54753 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.95□□□□□ -1.3
EPHB3P54753 DUXAP6-201ENST00000553858 601 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.95□□□□□ -1.3
EPHB3P54753 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.95□□□□□ -1.3
EPHB3P54753 AC011270.1-201ENST00000558606 583 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.95□□□□□ -1.3
EPHB3P54753 AC106785.4-201ENST00000569492 412 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AC004232.1-201ENST00000571388 208 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.95□□□□□ -1.3
EPHB3P54753 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.95□□□□□ -1.3
EPHB3P54753 AC067959.1-201ENST00000604334 379 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 AP005229.2-201ENST00000609980 697 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.95□□□□□ -1.3
EPHB3P54753 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 AP000577.1-201ENST00000624366 878 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 AC005609.4-201ENST00000625071 447 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 CASC19-212ENST00000641153 1287 ntBASIC6.95□□□□□ -1.3
EPHB3P54753 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
EPHB3P54753 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.95□□□□□ -1.3
EPHB3P54753 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
EPHB3P54753 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms