Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC105105.5-201ENST00000622635 1294 ntBASIC5.9□□□□□ -1.46
UBL4AP11441 AC079298.2-201ENST00000623885 459 ntBASIC5.9□□□□□ -1.46
UBL4AP11441 LINC02495-203ENST00000636704 242 ntBASIC5.9□□□□□ -1.46
UBL4AP11441 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.9□□□□□ -1.46
UBL4AP11441 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
UBL4AP11441 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
UBL4AP11441 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
UBL4AP11441 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
UBL4AP11441 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
UBL4AP11441 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
UBL4AP11441 AC125238.2-201ENST00000430003 1440 ntBASIC5.9□□□□□ -1.47
UBL4AP11441 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.9□□□□□ -1.47
UBL4AP11441 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.9□□□□□ -1.47
UBL4AP11441 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
UBL4AP11441 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
UBL4AP11441 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
UBL4AP11441 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
UBL4AP11441 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
UBL4AP11441 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 RN7SKP81-201ENST00000365603 331 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 RNA5SP105-201ENST00000391123 113 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 UBTFL2-201ENST00000411859 1191 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 AC234781.4-201ENST00000419384 244 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.89□□□□□ -1.47
UBL4AP11441 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.89□□□□□ -1.47
UBL4AP11441 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.89□□□□□ -1.47
UBL4AP11441 GTF2IP14-201ENST00000441415 586 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 AL355355.1-201ENST00000442900 793 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.89□□□□□ -1.47
UBL4AP11441 AL445991.1-201ENST00000450381 475 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.89□□□□□ -1.47
UBL4AP11441 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.89□□□□□ -1.47
UBL4AP11441 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.89□□□□□ -1.47
UBL4AP11441 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.89□□□□□ -1.47
UBL4AP11441 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.89□□□□□ -1.47
UBL4AP11441 AC016550.3-201ENST00000515706 767 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 COX6B1P4-201ENST00000519826 484 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.89□□□□□ -1.47
UBL4AP11441 AP005639.1-201ENST00000526939 192 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.89□□□□□ -1.47
UBL4AP11441 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.89□□□□□ -1.47
UBL4AP11441 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.89□□□□□ -1.47
UBL4AP11441 AC037479.1-201ENST00000558361 625 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 AC023968.1-201ENST00000560719 475 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 MIR4732-201ENST00000581873 76 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 AC092474.3-201ENST00000603022 568 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 AL589743.6-201ENST00000611025 117 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.89□□□□□ -1.47
UBL4AP11441 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
UBL4AP11441 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
UBL4AP11441 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 BIN2P1-201ENST00000504996 1530 ntBASIC5.89□□□□□ -1.47
UBL4AP11441 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UBL4AP11441 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.89□□□□□ -1.47
UBL4AP11441 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
UBL4AP11441 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
UBL4AP11441 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.88□□□□□ -1.47
UBL4AP11441 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.88□□□□□ -1.47
UBL4AP11441 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
UBL4AP11441 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
UBL4AP11441 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
UBL4AP11441 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 SNORD16-201ENST00000362803 99 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 AP003170.5-201ENST00000397185 335 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 RN7SKP281-201ENST00000410472 352 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 U3.43-201ENST00000410734 213 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.88□□□□□ -1.47
UBL4AP11441 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.88□□□□□ -1.47
UBL4AP11441 AL157884.1-201ENST00000424561 454 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.88□□□□□ -1.47
UBL4AP11441 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.88□□□□□ -1.47
UBL4AP11441 AC007563.3-201ENST00000433233 371 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.88□□□□□ -1.47
UBL4AP11441 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
UBL4AP11441 RPEP4-201ENST00000437636 602 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.88□□□□□ -1.47
UBL4AP11441 MTND2P25-201ENST00000449028 610 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.88□□□□□ -1.47
UBL4AP11441 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.88□□□□□ -1.47
UBL4AP11441 RPSAP39-201ENST00000467439 883 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.88□□□□□ -1.47
UBL4AP11441 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.88□□□□□ -1.47
UBL4AP11441 AC015524.1-201ENST00000491585 472 ntBASIC5.88□□□□□ -1.47
UBL4AP11441 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms