Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 FAM96AP1-201ENST00000430879 482 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AC110056.1-201ENST00000525759 911 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AP003400.2-201ENST00000624036 666 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 PKD1L3-201ENST00000620267 5199 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 RPS6P23-201ENST00000413224 722 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 BX679664.2-201ENST00000439282 283 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 MIR4260-201ENST00000583107 67 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 MIR4737-201ENST00000583979 81 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AC011487.3-201ENST00000593607 453 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 MIMT1-201ENST00000597105 1050 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AC020658.2-201ENST00000559030 4020 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AC017079.1-201ENST00000333650 415 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 IGKV7-3-201ENST00000357453 298 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 TMBIM7P-201ENST00000418074 855 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 RPL7AP25-201ENST00000423357 805 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 RPL34P6-201ENST00000432390 345 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 snoU13.29-201ENST00000459370 104 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 AL359757.2-201ENST00000624309 274 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 CUBNP3-201ENST00000457461 1784 ntBASIC2.32□□□□□ -2.04
MACF1Q9UPN3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MACF1Q9UPN3 VN1R51P-201ENST00000411675 945 ntBASIC2.31□□□□□ -2.04
MACF1Q9UPN3 AL139156.3-201ENST00000454802 394 ntBASIC2.31□□□□□ -2.04
MACF1Q9UPN3 AC022133.1-201ENST00000490961 571 ntBASIC2.31□□□□□ -2.04
MACF1Q9UPN3 AC090638.1-201ENST00000498296 909 ntBASIC2.31□□□□□ -2.04
MACF1Q9UPN3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 SNORA70C-201ENST00000384538 135 ntBASIC2.31□□□□□ -2.04
MACF1Q9UPN3 AL713922.1-201ENST00000416477 747 ntBASIC2.31□□□□□ -2.04
MACF1Q9UPN3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 MTIF2-204ENST00000403721 2386 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
MACF1Q9UPN3 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms