RNA–Protein interactions for RNA: ENST00000292823.6

PCYT1A-201, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCYT1A, Length 5,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-201ENST00000292823 NISCHQ9Y2I1 1504 aa18.03■□□□□ 0.48
PCYT1A-201ENST00000292823 DCAF8L2P0C7V8 631 aa17.15■□□□□ 0.34
PCYT1A-201ENST00000292823 SUPT5HO00267 1087 aaKnown RBP16.38■□□□□ 0.21
PCYT1A-201ENST00000292823 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
PCYT1A-201ENST00000292823 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
PCYT1A-201ENST00000292823 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
PCYT1A-201ENST00000292823 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
PCYT1A-201ENST00000292823 CCDC180Q9P1Z9 1646 aa15.44■□□□□ 0.06
PCYT1A-201ENST00000292823 APLP2Q06481 763 aa15.38■□□□□ 0.05
PCYT1A-201ENST00000292823 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
PCYT1A-201ENST00000292823 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
PCYT1A-201ENST00000292823 ABCC9O60706 1549 aa15.28■□□□□ 0.04
PCYT1A-201ENST00000292823 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.03
PCYT1A-201ENST00000292823 CHIC1Q5VXU3 224 aa15.2■□□□□ 0.02
PCYT1A-201ENST00000292823 HRCP23327 699 aa15.19■□□□□ 0.02
PCYT1A-201ENST00000292823 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
PCYT1A-201ENST00000292823 CENPBP07199 599 aaPredicted RBP15.09■□□□□ 0.01
PCYT1A-201ENST00000292823 CCER1Q8TC90 406 aaPredicted RBP15.05■□□□□ -0
PCYT1A-201ENST00000292823 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
PCYT1A-201ENST00000292823 UBTFP17480 764 aaKnown RBP14.91□□□□□ -0.02
PCYT1A-201ENST00000292823 TTBK1Q5TCY1 1321 aaPredicted RBP14.88□□□□□ -0.03
PCYT1A-201ENST00000292823 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
PCYT1A-201ENST00000292823 LOC105371045A0A1W2PR82 267 aa14.86□□□□□ -0.03
PCYT1A-201ENST00000292823 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
PCYT1A-201ENST00000292823 NACADO15069 1562 aa14.78□□□□□ -0.04
PCYT1A-201ENST00000292823 MYT1Q01538 1121 aa14.77□□□□□ -0.04
PCYT1A-201ENST00000292823 SCRIBQ14160 1630 aa14.77□□□□□ -0.04
PCYT1A-201ENST00000292823 ATP1B4Q9UN42 357 aaPredicted RBP14.74□□□□□ -0.05
PCYT1A-201ENST00000292823 ERICH6Q7L0X2 663 aa14.73□□□□□ -0.05
PCYT1A-201ENST00000292823 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
PCYT1A-201ENST00000292823 DCAF1Q9Y4B6 1507 aa14.69□□□□□ -0.06
PCYT1A-201ENST00000292823 PPARGC1BQ86YN6 1023 aaKnown RBP14.63□□□□□ -0.07
PCYT1A-201ENST00000292823 NEFLP07196 543 aa14.5□□□□□ -0.09
PCYT1A-201ENST00000292823 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
PCYT1A-201ENST00000292823 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
PCYT1A-201ENST00000292823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.43□□□□□ -0.1
PCYT1A-201ENST00000292823 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
PCYT1A-201ENST00000292823 MYO15BQ96JP2 1530 aa14.35□□□□□ -0.11
PCYT1A-201ENST00000292823 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
PCYT1A-201ENST00000292823 MYT1LQ9UL68 1186 aa14.28□□□□□ -0.12
PCYT1A-201ENST00000292823 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
PCYT1A-201ENST00000292823 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
PCYT1A-201ENST00000292823 ZNF316A6NFI3 1004 aaPredicted RBP14.24□□□□□ -0.13
PCYT1A-201ENST00000292823 ITGAEP38570 1179 aa14.24□□□□□ -0.13
PCYT1A-201ENST00000292823 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
PCYT1A-201ENST00000292823 EEA1Q15075 1411 aa14.17□□□□□ -0.14
PCYT1A-201ENST00000292823 ACIN1Q9UKV3 1341 aaKnown RBP14.16□□□□□ -0.14
PCYT1A-201ENST00000292823 GTF3C3Q9Y5Q9 886 aa14.12□□□□□ -0.15
PCYT1A-201ENST00000292823 CLSPNQ9HAW4 1339 aa14.1□□□□□ -0.15
PCYT1A-201ENST00000292823 FBLN2P98095 1184 aa14.1□□□□□ -0.15
PCYT1A-201ENST00000292823 FAM50AQ14320 339 aaKnown RBP14.08□□□□□ -0.16
PCYT1A-201ENST00000292823 SMARCA2P51531 1590 aa14.07□□□□□ -0.16
PCYT1A-201ENST00000292823 CDK11AQ9UQ88 783 aaPredicted RBP14.07□□□□□ -0.16
PCYT1A-201ENST00000292823 GOLGA3Q08378 1498 aa14.03□□□□□ -0.16
PCYT1A-201ENST00000292823 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
PCYT1A-201ENST00000292823 ANP32CO43423 234 aa13.97□□□□□ -0.17
PCYT1A-201ENST00000292823 TNIKQ9UKE5 1360 aa13.97□□□□□ -0.17
PCYT1A-201ENST00000292823 CLIP1P30622 1438 aa13.94□□□□□ -0.18
PCYT1A-201ENST00000292823 NEUROD1Q13562 356 aa13.93□□□□□ -0.18
PCYT1A-201ENST00000292823 WRNQ14191 1432 aaPredicted RBP eCLIP13.93□□□□□ -0.18
PCYT1A-201ENST00000292823 TRIM52Q96A61 297 aa13.93□□□□□ -0.18
PCYT1A-201ENST00000292823 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
PCYT1A-201ENST00000292823 ERCC6Q03468 1493 aa13.89□□□□□ -0.19
PCYT1A-201ENST00000292823 NPM1P06748 294 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCYT1A-201ENST00000292823 KIF27Q86VH2 1401 aa13.88□□□□□ -0.19
PCYT1A-201ENST00000292823 TOP2AP11388 1531 aaKnown RBP13.87□□□□□ -0.19
PCYT1A-201ENST00000292823 POLR3GLQ9BT43 218 aa13.87□□□□□ -0.19
PCYT1A-201ENST00000292823 CHMP7Q8WUX9 453 aaPredicted RBP13.84□□□□□ -0.19
PCYT1A-201ENST00000292823 CECR2Q9BXF3 1484 aa13.84□□□□□ -0.19
PCYT1A-201ENST00000292823 DAXXQ9UER7 740 aaPredicted RBP13.83□□□□□ -0.2
PCYT1A-201ENST00000292823 P3H3Q8IVL6 736 aa13.82□□□□□ -0.2
PCYT1A-201ENST00000292823 MROH2BQ7Z745 1585 aa13.8□□□□□ -0.2
PCYT1A-201ENST00000292823 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
PCYT1A-201ENST00000292823 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
PCYT1A-201ENST00000292823 SMARCA4P51532 1647 aa13.77□□□□□ -0.2
PCYT1A-201ENST00000292823 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
PCYT1A-201ENST00000292823 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
PCYT1A-201ENST00000292823 BCANQ96GW7 911 aa13.71□□□□□ -0.21
PCYT1A-201ENST00000292823 RTL5Q5HYW3 569 aaPredicted RBP13.71□□□□□ -0.21
PCYT1A-201ENST00000292823 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
PCYT1A-201ENST00000292823 WIZO95785 1651 aa13.68□□□□□ -0.22
PCYT1A-201ENST00000292823 MTUS2Q5JR59 1369 aa13.68□□□□□ -0.22
PCYT1A-201ENST00000292823 ESF1Q9H501 851 aaKnown RBP13.67□□□□□ -0.22
PCYT1A-201ENST00000292823 MIER1Q8N108 512 aa13.67□□□□□ -0.22
PCYT1A-201ENST00000292823 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
PCYT1A-201ENST00000292823 ATAD2BQ9ULI0 1458 aa13.65□□□□□ -0.22
PCYT1A-201ENST00000292823 SOGA1O94964 1423 aa13.64□□□□□ -0.23
PCYT1A-201ENST00000292823 ABCC8Q09428 1581 aa13.64□□□□□ -0.23
PCYT1A-201ENST00000292823 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
PCYT1A-201ENST00000292823 ARID3CA6NKF2 412 aa13.63□□□□□ -0.23
PCYT1A-201ENST00000292823 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
PCYT1A-201ENST00000292823 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
PCYT1A-201ENST00000292823 CUX2O14529 1486 aa13.6□□□□□ -0.23
PCYT1A-201ENST00000292823 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
PCYT1A-201ENST00000292823 FKBP8Q14318 412 aa13.59□□□□□ -0.23
PCYT1A-201ENST00000292823 DDX10Q13206 875 aaKnown RBP13.59□□□□□ -0.23
PCYT1A-201ENST00000292823 TSPY4P0CV99 314 aa13.58□□□□□ -0.24
PCYT1A-201ENST00000292823 TSPY10P0CW01 314 aa13.58□□□□□ -0.24
PCYT1A-201ENST00000292823 PLEKHD1A6NEE1 506 aa13.58□□□□□ -0.24
PCYT1A-201ENST00000292823 ZNF326Q5BKZ1 582 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms