RNA–Protein interactions for RNA: ENST00000620267.1

PKD1L3-201, Transcript of polycystin 1 like 3, transient receptor potential channel interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD1L3, Length 5,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1L3-201ENST00000620267 DCAF8L2P0C7V8 631 aa17.69■□□□□ 0.42
PKD1L3-201ENST00000620267 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
PKD1L3-201ENST00000620267 SUPT5HO00267 1087 aaKnown RBP16.55■□□□□ 0.24
PKD1L3-201ENST00000620267 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
PKD1L3-201ENST00000620267 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.16
PKD1L3-201ENST00000620267 APLP2Q06481 763 aa15.96■□□□□ 0.14
PKD1L3-201ENST00000620267 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
PKD1L3-201ENST00000620267 TRIM41Q8WV44 630 aa15.54■□□□□ 0.08
PKD1L3-201ENST00000620267 PELP1Q8IZL8 1130 aaKnown RBP15.44■□□□□ 0.06
PKD1L3-201ENST00000620267 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
PKD1L3-201ENST00000620267 ATP1B4Q9UN42 357 aaPredicted RBP15.28■□□□□ 0.04
PKD1L3-201ENST00000620267 RANGAP1P46060 587 aaPredicted RBP15.25■□□□□ 0.03
PKD1L3-201ENST00000620267 ZEB1P37275 1124 aaPredicted RBP15.2■□□□□ 0.02
PKD1L3-201ENST00000620267 TTBK1Q5TCY1 1321 aaPredicted RBP15.16■□□□□ 0.02
PKD1L3-201ENST00000620267 ABCC9O60706 1549 aa15.14■□□□□ 0.01
PKD1L3-201ENST00000620267 PCGF6Q9BYE7 350 aa15.08■□□□□ 0
PKD1L3-201ENST00000620267 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
PKD1L3-201ENST00000620267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
PKD1L3-201ENST00000620267 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
PKD1L3-201ENST00000620267 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
PKD1L3-201ENST00000620267 CENPBP07199 599 aaPredicted RBP14.88□□□□□ -0.03
PKD1L3-201ENST00000620267 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
PKD1L3-201ENST00000620267 TRIM26Q12899 539 aaPredicted RBP14.76□□□□□ -0.05
PKD1L3-201ENST00000620267 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
PKD1L3-201ENST00000620267 CCDC180Q9P1Z9 1646 aa14.69□□□□□ -0.06
PKD1L3-201ENST00000620267 NEFLP07196 543 aa14.66□□□□□ -0.06
PKD1L3-201ENST00000620267 ITGAEP38570 1179 aa14.61□□□□□ -0.07
PKD1L3-201ENST00000620267 PPARGC1BQ86YN6 1023 aaKnown RBP14.57□□□□□ -0.08
PKD1L3-201ENST00000620267 ERICH6Q7L0X2 663 aa14.55□□□□□ -0.08
PKD1L3-201ENST00000620267 ZCCHC6Q5VYS8 1495 aaKnown RBP14.54□□□□□ -0.08
PKD1L3-201ENST00000620267 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
PKD1L3-201ENST00000620267 LOC105371045A0A1W2PR82 267 aa14.5□□□□□ -0.09
PKD1L3-201ENST00000620267 FBLN2P98095 1184 aa14.46□□□□□ -0.09
PKD1L3-201ENST00000620267 RB1CC1Q8TDY2 1594 aa14.44□□□□□ -0.1
PKD1L3-201ENST00000620267 FAM50AQ14320 339 aaKnown RBP14.43□□□□□ -0.1
PKD1L3-201ENST00000620267 POLR3GLQ9BT43 218 aa14.41□□□□□ -0.1
PKD1L3-201ENST00000620267 CDK11AQ9UQ88 783 aaPredicted RBP14.37□□□□□ -0.11
PKD1L3-201ENST00000620267 TRIM52Q96A61 297 aa14.36□□□□□ -0.11
PKD1L3-201ENST00000620267 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
PKD1L3-201ENST00000620267 YTHDC1Q96MU7 727 aaKnown RBP14.31□□□□□ -0.12
PKD1L3-201ENST00000620267 NACADO15069 1562 aa14.31□□□□□ -0.12
PKD1L3-201ENST00000620267 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
PKD1L3-201ENST00000620267 HRCP23327 699 aa14.27□□□□□ -0.13
PKD1L3-201ENST00000620267 NPM1P06748 294 aaKnown RBP eCLIP14.23□□□□□ -0.13
PKD1L3-201ENST00000620267 DAXXQ9UER7 740 aaPredicted RBP14.18□□□□□ -0.14
PKD1L3-201ENST00000620267 ESF1Q9H501 851 aaKnown RBP14.15□□□□□ -0.14
PKD1L3-201ENST00000620267 P3H3Q8IVL6 736 aa14.13□□□□□ -0.15
PKD1L3-201ENST00000620267 NEUROD1Q13562 356 aa14.1□□□□□ -0.15
PKD1L3-201ENST00000620267 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
PKD1L3-201ENST00000620267 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
PKD1L3-201ENST00000620267 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
PKD1L3-201ENST00000620267 ZNF326Q5BKZ1 582 aaKnown RBP14.05□□□□□ -0.16
PKD1L3-201ENST00000620267 BCANQ96GW7 911 aa14.04□□□□□ -0.16
PKD1L3-201ENST00000620267 CHMP7Q8WUX9 453 aaPredicted RBP14.04□□□□□ -0.16
PKD1L3-201ENST00000620267 BAZ1BQ9UIG0 1483 aaKnown RBP14.03□□□□□ -0.16
PKD1L3-201ENST00000620267 EEA1Q15075 1411 aa14.03□□□□□ -0.16
PKD1L3-201ENST00000620267 NEFMP07197 916 aa14.02□□□□□ -0.16
PKD1L3-201ENST00000620267 ARID3CA6NKF2 412 aa14.02□□□□□ -0.17
PKD1L3-201ENST00000620267 ANP32CO43423 234 aa14.01□□□□□ -0.17
PKD1L3-201ENST00000620267 DIEXFQ68CQ4 756 aaKnown RBP14.01□□□□□ -0.17
PKD1L3-201ENST00000620267 ACIN1Q9UKV3 1341 aaKnown RBP13.98□□□□□ -0.17
PKD1L3-201ENST00000620267 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
PKD1L3-201ENST00000620267 BAZ1AQ9NRL2 1556 aaPredicted RBP13.94□□□□□ -0.18
PKD1L3-201ENST00000620267 CLSPNQ9HAW4 1339 aa13.93□□□□□ -0.18
PKD1L3-201ENST00000620267 RSF1Q96T23 1441 aaPredicted RBP13.93□□□□□ -0.18
PKD1L3-201ENST00000620267 TSPY4P0CV99 314 aa13.93□□□□□ -0.18
PKD1L3-201ENST00000620267 TSPY10P0CW01 314 aa13.93□□□□□ -0.18
PKD1L3-201ENST00000620267 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
PKD1L3-201ENST00000620267 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
PKD1L3-201ENST00000620267 MYT1Q01538 1121 aa13.9□□□□□ -0.18
PKD1L3-201ENST00000620267 TONSLQ96HA7 1378 aa13.87□□□□□ -0.19
PKD1L3-201ENST00000620267 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
PKD1L3-201ENST00000620267 WRNQ14191 1432 aaPredicted RBP eCLIP13.87□□□□□ -0.19
PKD1L3-201ENST00000620267 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
PKD1L3-201ENST00000620267 ZNF316A6NFI3 1004 aaPredicted RBP13.85□□□□□ -0.19
PKD1L3-201ENST00000620267 CLIP1P30622 1438 aa13.84□□□□□ -0.19
PKD1L3-201ENST00000620267 GOLGA3Q08378 1498 aa13.83□□□□□ -0.19
PKD1L3-201ENST00000620267 CHGAP10645 457 aaKnown RBP13.83□□□□□ -0.2
PKD1L3-201ENST00000620267 PLEKHD1A6NEE1 506 aa13.82□□□□□ -0.2
PKD1L3-201ENST00000620267 CANXP27824 592 aaKnown RBP13.78□□□□□ -0.2
PKD1L3-201ENST00000620267 SLC24A1O60721 1099 aa13.75□□□□□ -0.21
PKD1L3-201ENST00000620267 CEP164Q9UPV0 1460 aa13.75□□□□□ -0.21
PKD1L3-201ENST00000620267 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
PKD1L3-201ENST00000620267 SMARCA2P51531 1590 aa13.73□□□□□ -0.21
PKD1L3-201ENST00000620267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.21
PKD1L3-201ENST00000620267 CHIC2Q9UKJ5 165 aa13.7□□□□□ -0.22
PKD1L3-201ENST00000620267 PDS5BQ9NTI5 1447 aa13.69□□□□□ -0.22
PKD1L3-201ENST00000620267 RTL5Q5HYW3 569 aaPredicted RBP13.68□□□□□ -0.22
PKD1L3-201ENST00000620267 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
PKD1L3-201ENST00000620267 KCNH8Q96L42 1107 aa13.65□□□□□ -0.22
PKD1L3-201ENST00000620267 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
PKD1L3-201ENST00000620267 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
PKD1L3-201ENST00000620267 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
PKD1L3-201ENST00000620267 CFDP1Q9UEE9 299 aaPredicted RBP13.63□□□□□ -0.23
PKD1L3-201ENST00000620267 PPP1R15AO75807 674 aaPredicted RBP13.61□□□□□ -0.23
PKD1L3-201ENST00000620267 CECR2Q9BXF3 1484 aa13.6□□□□□ -0.23
PKD1L3-201ENST00000620267 CARMIL1Q5VZK9 1371 aa13.57□□□□□ -0.24
PKD1L3-201ENST00000620267 CUX2O14529 1486 aa13.57□□□□□ -0.24
PKD1L3-201ENST00000620267 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
PKD1L3-201ENST00000620267 CARMIL2Q6F5E8 1435 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms