Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 DYNC1I2P1-201ENST00000435916 1838 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 TRIM60P9Y-201ENST00000438459 816 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 TRIM60P11Y-201ENST00000445313 801 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AL035690.1-201ENST00000490892 383 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AP006289.1-201ENST00000538089 277 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AC233699.1-201ENST00000569955 1168 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 AC006338.2-201ENST00000616864 791 ntBASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC9.09□□□□□ -0.95
RIMBP3Q9UFD9 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 GAPDHP15-201ENST00000398586 975 ntBASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 AC019205.1-201ENST00000421830 730 ntBASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 MGAT2P2-201ENST00000427194 797 ntBASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 BMS1P19-201ENST00000433925 393 ntBASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 AC024940.3-201ENST00000538551 316 ntBASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 AC095055.1-201ENST00000603472 1113 ntBASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
RIMBP3Q9UFD9 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 SNURFL-201ENST00000309296 343 ntBASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 CYP4F30P-202ENST00000420048 405 ntBASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 AC015983.1-201ENST00000441577 373 ntBASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 MIR4737-201ENST00000583979 81 ntBASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 AC011447.4-201ENST00000587562 111 ntBASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
RIMBP3Q9UFD9 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 AC062029.1-202ENST00000606164 3651 ntBASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 AC104118.1-201ENST00000607625 1589 ntBASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 RNA5SP478-201ENST00000364657 115 ntBASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 RPL7P57-201ENST00000423238 740 ntBASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 CHIAP3-201ENST00000423668 1133 ntBASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 TRGV7-201ENST00000427089 353 ntBASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 AC021006.3-201ENST00000530771 192 ntBASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 LRRC37A17P-201ENST00000570311 4693 ntBASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 SLC30A9-201ENST00000264451 6218 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms