Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
DEPDC4Q8N2C3 OR5BR1P-201ENST00000524992 1330 ntBASIC7.52□□□□□ -1.2
DEPDC4Q8N2C3 KYNUP2-201ENST00000582280 1329 ntBASIC7.52□□□□□ -1.2
DEPDC4Q8N2C3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.52□□□□□ -1.2
DEPDC4Q8N2C3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.52□□□□□ -1.2
DEPDC4Q8N2C3 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
DEPDC4Q8N2C3 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.2
DEPDC4Q8N2C3 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
DEPDC4Q8N2C3 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.52□□□□□ -1.2
DEPDC4Q8N2C3 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC131971.1-201ENST00000332881 1482 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-723P-201ENST00000383973 107 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 MIR320B1-201ENST00000390209 79 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AL034374.1-201ENST00000406329 351 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 MIR1303-201ENST00000408625 86 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 RN7SKP108-201ENST00000411367 328 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 UQCRHP2-201ENST00000415651 288 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 KRT18P53-201ENST00000431919 117 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 IFNWP5-201ENST00000445100 588 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 OR2AI1P-201ENST00000448534 932 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 STMN1P2-201ENST00000508435 439 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-507P-201ENST00000516045 100 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 RNA5SP460-201ENST00000516789 100 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 RNU6-1261P-201ENST00000517194 104 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC138915.2-201ENST00000569776 97 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC010487.1-201ENST00000594408 1172 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC024451.4-201ENST00000602578 752 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 TAS2R6P-201ENST00000605022 826 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC087045.1-201ENST00000605856 382 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC093458.1-201ENST00000608912 222 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC128687.2-201ENST00000609657 566 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AL592227.1-201ENST00000614748 126 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC027807.2-201ENST00000616099 408 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 OR8G7P-201ENST00000616658 848 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 AL139811.2-201ENST00000373465 1630 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 MTND5P17-201ENST00000418405 1603 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 DCAF13P1-201ENST00000495256 1330 ntBASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
DEPDC4Q8N2C3 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.51□□□□□ -1.21
DEPDC4Q8N2C3 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms