RNA–Protein interactions for RNA: ENST00000552046.1

AC090502.3-201, humanhuman

TSL 3 BASIC

Gene AC090502.3, Length 529 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090502.3-201ENST00000552046 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
AC090502.3-201ENST00000552046 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
AC090502.3-201ENST00000552046 SENP3Q9H4L4 574 aaPredicted RBP24.47■■□□□ 1.51
AC090502.3-201ENST00000552046 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
AC090502.3-201ENST00000552046 FOXD1Q16676 465 aa22.92■■□□□ 1.26
AC090502.3-201ENST00000552046 POTEDQ86YR6 584 aa22.11■■□□□ 1.13
AC090502.3-201ENST00000552046 MSH5O43196 834 aa21.61■■□□□ 1.05
AC090502.3-201ENST00000552046 PIAS4Q8N2W9 510 aaPredicted RBP21.27■■□□□ 1
AC090502.3-201ENST00000552046 PPP6R1Q9UPN7 881 aa21.02■□□□□ 0.96
AC090502.3-201ENST00000552046 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
AC090502.3-201ENST00000552046 ADRA2BP18089 450 aa20.92■□□□□ 0.94
AC090502.3-201ENST00000552046 MAPK8IP2Q13387 824 aaPredicted RBP19.38■□□□□ 0.69
AC090502.3-201ENST00000552046 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
AC090502.3-201ENST00000552046 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
AC090502.3-201ENST00000552046 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
AC090502.3-201ENST00000552046 DCAF8L1A6NGE4 600 aa18.57■□□□□ 0.56
AC090502.3-201ENST00000552046 RNF39Q9H2S5 420 aa18.43■□□□□ 0.54
AC090502.3-201ENST00000552046 HOXD11P31277 338 aaPredicted RBP18.39■□□□□ 0.53
AC090502.3-201ENST00000552046 PPP4R3CPQ6ZMV5 832 aa18.34■□□□□ 0.53
AC090502.3-201ENST00000552046 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
AC090502.3-201ENST00000552046 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
AC090502.3-201ENST00000552046 C1QBPQ07021 282 aaKnown RBP18.08■□□□□ 0.48
AC090502.3-201ENST00000552046 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
AC090502.3-201ENST00000552046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
AC090502.3-201ENST00000552046 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
AC090502.3-201ENST00000552046 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
AC090502.3-201ENST00000552046 POTEHQ6S545 545 aa17.19■□□□□ 0.34
AC090502.3-201ENST00000552046 U3KPZ7 1027 aaPredicted RBP17.13■□□□□ 0.33
AC090502.3-201ENST00000552046 DSG3P32926 999 aa17.07■□□□□ 0.32
AC090502.3-201ENST00000552046 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
AC090502.3-201ENST00000552046 CAPN15O75808 1086 aa17.02■□□□□ 0.32
AC090502.3-201ENST00000552046 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
AC090502.3-201ENST00000552046 ABCB7O75027 752 aa16.61■□□□□ 0.25
AC090502.3-201ENST00000552046 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
AC090502.3-201ENST00000552046 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
AC090502.3-201ENST00000552046 APLP2Q06481 763 aa16.48■□□□□ 0.23
AC090502.3-201ENST00000552046 KCNA4P22459 653 aa16.44■□□□□ 0.22
AC090502.3-201ENST00000552046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
AC090502.3-201ENST00000552046 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
AC090502.3-201ENST00000552046 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
AC090502.3-201ENST00000552046 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
AC090502.3-201ENST00000552046 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
AC090502.3-201ENST00000552046 POLA2Q14181 598 aa16.03■□□□□ 0.16
AC090502.3-201ENST00000552046 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
AC090502.3-201ENST00000552046 SP7Q8TDD2 431 aaPredicted RBP15.85■□□□□ 0.13
AC090502.3-201ENST00000552046 AKT1S1Q96B36 256 aa15.77■□□□□ 0.12
AC090502.3-201ENST00000552046 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
AC090502.3-201ENST00000552046 ATF5Q9Y2D1 282 aaPredicted RBP15.67■□□□□ 0.1
AC090502.3-201ENST00000552046 REM2Q8IYK8 340 aaPredicted RBP15.65■□□□□ 0.1
AC090502.3-201ENST00000552046 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
AC090502.3-201ENST00000552046 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
AC090502.3-201ENST00000552046 PITPNM1O00562 1244 aa15.52■□□□□ 0.08
AC090502.3-201ENST00000552046 NISCHQ9Y2I1 1504 aa15.51■□□□□ 0.07
AC090502.3-201ENST00000552046 HAX1O00165 279 aa15.5■□□□□ 0.07
AC090502.3-201ENST00000552046 FXR2P51116 673 aaKnown RBP eCLIP15.47■□□□□ 0.07
AC090502.3-201ENST00000552046 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
AC090502.3-201ENST00000552046 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
AC090502.3-201ENST00000552046 EVX2Q03828 476 aa15.34■□□□□ 0.05
AC090502.3-201ENST00000552046 ZBTB22O15209 634 aa15.13■□□□□ 0.01
AC090502.3-201ENST00000552046 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
AC090502.3-201ENST00000552046 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
AC090502.3-201ENST00000552046 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
AC090502.3-201ENST00000552046 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
AC090502.3-201ENST00000552046 FBLN2P98095 1184 aa15.01□□□□□ -0.01
AC090502.3-201ENST00000552046 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
AC090502.3-201ENST00000552046 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
AC090502.3-201ENST00000552046 C19orf67A6NJJ6 358 aa14.99□□□□□ -0.01
AC090502.3-201ENST00000552046 SPDYE1Q8NFV5 336 aaPredicted RBP14.99□□□□□ -0.01
AC090502.3-201ENST00000552046 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
AC090502.3-201ENST00000552046 GABBR2O75899 941 aa14.91□□□□□ -0.02
AC090502.3-201ENST00000552046 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
AC090502.3-201ENST00000552046 LHX8Q68G74 356 aa14.85□□□□□ -0.03
AC090502.3-201ENST00000552046 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
AC090502.3-201ENST00000552046 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
AC090502.3-201ENST00000552046 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
AC090502.3-201ENST00000552046 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
AC090502.3-201ENST00000552046 PABPN1Q86U42 306 aaKnown RBP eCLIP14.63□□□□□ -0.07
AC090502.3-201ENST00000552046 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
AC090502.3-201ENST00000552046 FARP1Q9Y4F1 1045 aaPredicted RBP14.51□□□□□ -0.09
AC090502.3-201ENST00000552046 CLCN6P51797 869 aa14.38□□□□□ -0.11
AC090502.3-201ENST00000552046 PLSCR2Q9NRY7 297 aa14.38□□□□□ -0.11
AC090502.3-201ENST00000552046 DCBLD2Q96PD2 775 aa14.36□□□□□ -0.11
AC090502.3-201ENST00000552046 ZNF579Q8NAF0 562 aaKnown RBP14.32□□□□□ -0.12
AC090502.3-201ENST00000552046 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
AC090502.3-201ENST00000552046 GALR2O43603 387 aaPredicted RBP14.22□□□□□ -0.13
AC090502.3-201ENST00000552046 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
AC090502.3-201ENST00000552046 OTUD5Q96G74 571 aa14.19□□□□□ -0.14
AC090502.3-201ENST00000552046 ABCC9O60706 1549 aa14.15□□□□□ -0.14
AC090502.3-201ENST00000552046 POTEB2H3BUK9 544 aa14.15□□□□□ -0.14
AC090502.3-201ENST00000552046 PHF12Q96QT6 1004 aa14.07□□□□□ -0.16
AC090502.3-201ENST00000552046 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
AC090502.3-201ENST00000552046 POTEMA6NI47 508 aa14.03□□□□□ -0.16
AC090502.3-201ENST00000552046 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
AC090502.3-201ENST00000552046 CCDC180Q9P1Z9 1646 aa14□□□□□ -0.17
AC090502.3-201ENST00000552046 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
AC090502.3-201ENST00000552046 POTEGQ6S5H5 508 aa13.97□□□□□ -0.17
AC090502.3-201ENST00000552046 MNX1P50219 401 aaPredicted RBP13.91□□□□□ -0.18
AC090502.3-201ENST00000552046 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
AC090502.3-201ENST00000552046 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
AC090502.3-201ENST00000552046 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms