Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 FAM85B-201ENST00000519726 792 ntTSL 5 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AC008489.1-201ENST00000524271 483 ntBASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 ATP5J2P4-201ENST00000538774 267 ntBASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC02395-202ENST00000547443 724 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AL606834.1-201ENST00000553836 1169 ntBASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 MIR4517-201ENST00000578855 79 ntBASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AC007229.1-201ENST00000590455 412 ntBASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AC011498.1-201ENST00000591414 478 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 RPS5-205ENST00000598495 800 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AC036176.3-201ENST00000602456 418 ntBASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 MIR1914-201ENST00000607800 80 ntBASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 IPO7-208ENST00000630083 195 ntTSL 5 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AC005865.2-202ENST00000635814 725 ntBASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 MIR4275-201ENST00000636486 87 ntBASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 WDR47-203ENST00000369962 4199 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AGAP11-201ENST00000433214 3078 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 RASGRP4-205ENST00000586305 3061 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC02288-201ENST00000500215 2924 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 MPP2-220ENST00000622681 4242 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 PGA3-201ENST00000325558 1748 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 SLC7A8-204ENST00000422941 3018 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 KLHL10-201ENST00000293303 2057 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 SON-203ENST00000381679 7860 ntTSL 5 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 PCYT1A-206ENST00000431016 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 NFXL1-206ENST00000507489 3833 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 NLRP12-203ENST00000391772 3205 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 C14orf159-201ENST00000256324 2967 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 CLNS1A-204ENST00000525428 2993 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 AP3B2-203ENST00000535359 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 EPX-201ENST00000225371 2708 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
KRTAP3-3Q9BYR6 KCNK10-201ENST00000312350 2396 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SGO1-AS1-204ENST00000634618 2371 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 UQCC1-202ENST00000359226 2036 ntTSL 4 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 PAX3-204ENST00000350526 3610 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 YIPF5-204ENST00000513112 2135 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 OC90-201ENST00000254627 1782 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SCG2-201ENST00000305409 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 HIST1H2BE-202ENST00000634910 2585 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 TRAF3IP3-205ENST00000400959 1854 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AGPAT4-IT1-201ENST00000624499 1878 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 COX19-201ENST00000344111 3666 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AL360294.1-201ENST00000640945 2438 ntBASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 IGSF11-208ENST00000489689 3320 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 STAT3-211ENST00000585517 3319 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 RPGRIP1-213ENST00000557771 3870 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ACVR2B-AS1-201ENST00000441531 2517 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 RAE1-203ENST00000395841 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP3-3Q9BYR6 AC123769.1-201ENST00000530992 3192 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms