Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AP002991.2-201ENST00000623807 2801 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 PANDAR-201ENST00000629595 1506 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 MIR640-201ENST00000385086 96 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 OR13C1P-201ENST00000457612 963 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 ATP5J2P6-201ENST00000565203 266 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 AL109618.2-201ENST00000605527 211 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 AC114876.1-201ENST00000490962 1366 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 AC022034.1-201ENST00000512867 2156 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 MYL6P5-201ENST00000412707 459 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 AC091905.4-201ENST00000623432 202 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 GAPDHP42-201ENST00000406848 981 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 AC019205.1-201ENST00000421830 730 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 OR2AM1P-201ENST00000422137 422 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.61□□□□□ -1.67
VPS13CQ709C8 AC078899.1-201ENST00000521432 1185 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 AL353795.3-201ENST00000624351 5702 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 AC104447.1-201ENST00000624214 2124 ntBASIC4.61□□□□□ -1.67
VPS13CQ709C8 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VPS13CQ709C8 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 RPL7P16-201ENST00000479738 738 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 IGLV3-24-201ENST00000517477 197 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 OR5AN2P-201ENST00000534535 896 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 XIST-206ENST00000434839 2865 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 DNAJA1P6-201ENST00000437347 354 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 MRPS33P2-201ENST00000507850 322 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 GCSHP4-201ENST00000538792 439 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 AC087283.1-201ENST00000604029 1074 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 MIR6780A-201ENST00000615089 68 ntBASIC4.6□□□□□ -1.67
VPS13CQ709C8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS13CQ709C8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.6□□□□□ -1.67
VPS13CQ709C8 HMGB1P44-201ENST00000508597 572 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms