RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 AEBP2Q6ZN18 517 aaPredicted RBP26.84■■□□□ 1.89
GCSHP4-201ENST00000538792 CHIC1Q5VXU3 224 aa25.9■■□□□ 1.74
GCSHP4-201ENST00000538792 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
GCSHP4-201ENST00000538792 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
GCSHP4-201ENST00000538792 FOXD1Q16676 465 aa21.17■□□□□ 0.98
GCSHP4-201ENST00000538792 PLPPR3Q6T4P5 718 aa20.88■□□□□ 0.93
GCSHP4-201ENST00000538792 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
GCSHP4-201ENST00000538792 ADRA2BP18089 450 aa20.17■□□□□ 0.82
GCSHP4-201ENST00000538792 PIAS4Q8N2W9 510 aaPredicted RBP19.87■□□□□ 0.77
GCSHP4-201ENST00000538792 MSH5O43196 834 aa19.53■□□□□ 0.72
GCSHP4-201ENST00000538792 PPP4R3CPQ6ZMV5 832 aa18.4■□□□□ 0.54
GCSHP4-201ENST00000538792 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
GCSHP4-201ENST00000538792 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
GCSHP4-201ENST00000538792 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
GCSHP4-201ENST00000538792 DMRT2Q9Y5R5 561 aa18.11■□□□□ 0.49
GCSHP4-201ENST00000538792 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
GCSHP4-201ENST00000538792 NCBP3Q53F19 620 aaKnown RBP17.77■□□□□ 0.44
GCSHP4-201ENST00000538792 KCNA4P22459 653 aa17.73■□□□□ 0.43
GCSHP4-201ENST00000538792 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
GCSHP4-201ENST00000538792 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
GCSHP4-201ENST00000538792 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
GCSHP4-201ENST00000538792 DCAF8L1A6NGE4 600 aa17.33■□□□□ 0.36
GCSHP4-201ENST00000538792 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
GCSHP4-201ENST00000538792 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
GCSHP4-201ENST00000538792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.28
GCSHP4-201ENST00000538792 RNF39Q9H2S5 420 aa16.77■□□□□ 0.28
GCSHP4-201ENST00000538792 SLC4A2P04920 1241 aa16.71■□□□□ 0.27
GCSHP4-201ENST00000538792 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
GCSHP4-201ENST00000538792 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
GCSHP4-201ENST00000538792 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
GCSHP4-201ENST00000538792 ZBTB22O15209 634 aa16.36■□□□□ 0.21
GCSHP4-201ENST00000538792 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.2
GCSHP4-201ENST00000538792 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
GCSHP4-201ENST00000538792 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
GCSHP4-201ENST00000538792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
GCSHP4-201ENST00000538792 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
GCSHP4-201ENST00000538792 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
GCSHP4-201ENST00000538792 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
GCSHP4-201ENST00000538792 CAPN15O75808 1086 aa16.06■□□□□ 0.16
GCSHP4-201ENST00000538792 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.16
GCSHP4-201ENST00000538792 APLP2Q06481 763 aa15.98■□□□□ 0.15
GCSHP4-201ENST00000538792 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
GCSHP4-201ENST00000538792 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
GCSHP4-201ENST00000538792 DSG3P32926 999 aa15.88■□□□□ 0.13
GCSHP4-201ENST00000538792 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
GCSHP4-201ENST00000538792 ABCB7O75027 752 aa15.78■□□□□ 0.12
GCSHP4-201ENST00000538792 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
GCSHP4-201ENST00000538792 POLA2Q14181 598 aa15.63■□□□□ 0.09
GCSHP4-201ENST00000538792 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
GCSHP4-201ENST00000538792 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
GCSHP4-201ENST00000538792 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
GCSHP4-201ENST00000538792 FBLN2P98095 1184 aa15.12■□□□□ 0.01
GCSHP4-201ENST00000538792 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
GCSHP4-201ENST00000538792 SPDYE2BA6NHP3 402 aa14.87□□□□□ -0.03
GCSHP4-201ENST00000538792 SPDYE6P0CI01 402 aa14.87□□□□□ -0.03
GCSHP4-201ENST00000538792 SPDYE2Q495Y8 402 aa14.87□□□□□ -0.03
GCSHP4-201ENST00000538792 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
GCSHP4-201ENST00000538792 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
GCSHP4-201ENST00000538792 SSUH2Q9Y2M2 353 aa14.78□□□□□ -0.04
GCSHP4-201ENST00000538792 REM2Q8IYK8 340 aaPredicted RBP14.74□□□□□ -0.05
GCSHP4-201ENST00000538792 SPDYE4A6NLX3 237 aa14.66□□□□□ -0.06
GCSHP4-201ENST00000538792 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
GCSHP4-201ENST00000538792 PITPNM1O00562 1244 aa14.6□□□□□ -0.07
GCSHP4-201ENST00000538792 CHRDL2Q6WN34 429 aa14.59□□□□□ -0.07
GCSHP4-201ENST00000538792 SPDYE1Q8NFV5 336 aaPredicted RBP14.49□□□□□ -0.09
GCSHP4-201ENST00000538792 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
GCSHP4-201ENST00000538792 FKBP8Q14318 412 aa14.46□□□□□ -0.09
GCSHP4-201ENST00000538792 POTEHQ6S545 545 aa14.42□□□□□ -0.1
GCSHP4-201ENST00000538792 PROM2Q8N271 834 aa14.41□□□□□ -0.1
GCSHP4-201ENST00000538792 PIP4P2Q8N4L2 257 aa14.38□□□□□ -0.11
GCSHP4-201ENST00000538792 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
GCSHP4-201ENST00000538792 PRR29P0C7W0 189 aa14.28□□□□□ -0.12
GCSHP4-201ENST00000538792 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
GCSHP4-201ENST00000538792 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
GCSHP4-201ENST00000538792 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
GCSHP4-201ENST00000538792 CREBZFQ9NS37 354 aa14.1□□□□□ -0.15
GCSHP4-201ENST00000538792 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
GCSHP4-201ENST00000538792 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
GCSHP4-201ENST00000538792 HAX1O00165 279 aa13.94□□□□□ -0.18
GCSHP4-201ENST00000538792 FBXO3Q9UK99 471 aa13.93□□□□□ -0.18
GCSHP4-201ENST00000538792 MIER1Q8N108 512 aa13.92□□□□□ -0.18
GCSHP4-201ENST00000538792 EVX2Q03828 476 aa13.9□□□□□ -0.18
GCSHP4-201ENST00000538792 C19orf67A6NJJ6 358 aa13.88□□□□□ -0.19
GCSHP4-201ENST00000538792 PLCD3Q8N3E9 789 aa13.85□□□□□ -0.19
GCSHP4-201ENST00000538792 VASPP50552 380 aaPredicted RBP13.82□□□□□ -0.2
GCSHP4-201ENST00000538792 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
GCSHP4-201ENST00000538792 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
GCSHP4-201ENST00000538792 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
GCSHP4-201ENST00000538792 SP7Q8TDD2 431 aaPredicted RBP13.74□□□□□ -0.21
GCSHP4-201ENST00000538792 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
GCSHP4-201ENST00000538792 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
GCSHP4-201ENST00000538792 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
GCSHP4-201ENST00000538792 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
GCSHP4-201ENST00000538792 NUBP1P53384 320 aa13.63□□□□□ -0.23
GCSHP4-201ENST00000538792 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
GCSHP4-201ENST00000538792 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
GCSHP4-201ENST00000538792 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
GCSHP4-201ENST00000538792 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
GCSHP4-201ENST00000538792 GABBR2O75899 941 aa13.56□□□□□ -0.24
GCSHP4-201ENST00000538792 PHF12Q96QT6 1004 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms