Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL121583.1-201ENST00000612444 682 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AC006338.1-201ENST00000618453 749 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 SAMMSON-214ENST00000641395 1264 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 AL136298.2-201ENST00000556497 1570 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 CR381670.1-201ENST00000624291 1693 ntBASIC9.36□□□□□ -0.91
PDZRN3Q9UPQ7 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 THAP12P3-201ENST00000456373 2266 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AP000766.1-201ENST00000561746 4140 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AL133320.1-201ENST00000621423 2352 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 RNU6-1119P-201ENST00000384349 108 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AL590002.1-201ENST00000406554 418 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 EEF1B2P8-201ENST00000414101 671 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AL445528.1-201ENST00000426330 420 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 BX119321.1-201ENST00000428912 797 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 ARL6IP1P2-201ENST00000431356 563 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AL845321.1-201ENST00000444603 348 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 KF459542.1-201ENST00000450908 553 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AC008628.2-201ENST00000502605 298 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AC093677.1-201ENST00000514414 678 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AC096661.1-201ENST00000515870 822 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 IGHVII-51-2-201ENST00000519778 259 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 OR7E161P-201ENST00000533722 967 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 IGHV1OR15-3-201ENST00000564926 351 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 U47924.1-201ENST00000606539 434 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 Z99129.1-201ENST00000612510 255 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 MIR8089-201ENST00000620165 82 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AC007490.1-201ENST00000624321 703 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 MIR665-201ENST00000635949 72 ntBASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PDZRN3Q9UPQ7 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 MAPK10-371ENST00000641952 5209 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AC107977.1-201ENST00000355745 939 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AL355615.1-201ENST00000406187 641 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 AL512504.1-201ENST00000415494 778 ntBASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 HCG25-217ENST00000422366 702 ntTSL 3 BASIC9.34□□□□□ -0.91
PDZRN3Q9UPQ7 PCNPP2-201ENST00000441651 455 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms