RNA–Protein interactions for RNA: ENST00000528978.5

AP003557.1-202, humanhuman

TSL 4 BASIC

Gene AP003557.1, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003557.1-202ENST00000528978 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
AP003557.1-202ENST00000528978 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
AP003557.1-202ENST00000528978 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
AP003557.1-202ENST00000528978 SENP3Q9H4L4 574 aaPredicted RBP20.6■□□□□ 0.89
AP003557.1-202ENST00000528978 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
AP003557.1-202ENST00000528978 FOXD1Q16676 465 aa19.24■□□□□ 0.67
AP003557.1-202ENST00000528978 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
AP003557.1-202ENST00000528978 ADRA2BP18089 450 aa18.58■□□□□ 0.56
AP003557.1-202ENST00000528978 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.48
AP003557.1-202ENST00000528978 MSH5O43196 834 aa17.56■□□□□ 0.4
AP003557.1-202ENST00000528978 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
AP003557.1-202ENST00000528978 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
AP003557.1-202ENST00000528978 KCNA4P22459 653 aa16.85■□□□□ 0.29
AP003557.1-202ENST00000528978 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
AP003557.1-202ENST00000528978 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
AP003557.1-202ENST00000528978 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
AP003557.1-202ENST00000528978 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
AP003557.1-202ENST00000528978 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
AP003557.1-202ENST00000528978 RNF216Q9NWF9 866 aaPredicted RBP16.23■□□□□ 0.19
AP003557.1-202ENST00000528978 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
AP003557.1-202ENST00000528978 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
AP003557.1-202ENST00000528978 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
AP003557.1-202ENST00000528978 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
AP003557.1-202ENST00000528978 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
AP003557.1-202ENST00000528978 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
AP003557.1-202ENST00000528978 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
AP003557.1-202ENST00000528978 ZBTB22O15209 634 aa15.58■□□□□ 0.08
AP003557.1-202ENST00000528978 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
AP003557.1-202ENST00000528978 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
AP003557.1-202ENST00000528978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.05
AP003557.1-202ENST00000528978 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
AP003557.1-202ENST00000528978 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
AP003557.1-202ENST00000528978 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
AP003557.1-202ENST00000528978 ATF5Q9Y2D1 282 aaPredicted RBP14.9□□□□□ -0.02
AP003557.1-202ENST00000528978 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
AP003557.1-202ENST00000528978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
AP003557.1-202ENST00000528978 HNRNPUL2Q1KMD3 747 aaKnown RBP14.85□□□□□ -0.03
AP003557.1-202ENST00000528978 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
AP003557.1-202ENST00000528978 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
AP003557.1-202ENST00000528978 ATXN8OSP0DMR3 200 aa14.79□□□□□ -0.04
AP003557.1-202ENST00000528978 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
AP003557.1-202ENST00000528978 CAPN15O75808 1086 aa14.65□□□□□ -0.06
AP003557.1-202ENST00000528978 APLP2Q06481 763 aa14.63□□□□□ -0.07
AP003557.1-202ENST00000528978 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
AP003557.1-202ENST00000528978 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
AP003557.1-202ENST00000528978 DSG3P32926 999 aa14.46□□□□□ -0.09
AP003557.1-202ENST00000528978 ABCB7O75027 752 aa14.45□□□□□ -0.1
AP003557.1-202ENST00000528978 POLA2Q14181 598 aa14.4□□□□□ -0.1
AP003557.1-202ENST00000528978 MKRN4PQ13434 485 aaPredicted RBP14.23□□□□□ -0.13
AP003557.1-202ENST00000528978 FBLN2P98095 1184 aa14.03□□□□□ -0.16
AP003557.1-202ENST00000528978 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
AP003557.1-202ENST00000528978 OSCARQ8IYS5 282 aa13.95□□□□□ -0.18
AP003557.1-202ENST00000528978 FKBP8Q14318 412 aa13.92□□□□□ -0.18
AP003557.1-202ENST00000528978 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
AP003557.1-202ENST00000528978 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
AP003557.1-202ENST00000528978 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
AP003557.1-202ENST00000528978 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
AP003557.1-202ENST00000528978 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
AP003557.1-202ENST00000528978 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
AP003557.1-202ENST00000528978 PROM2Q8N271 834 aa13.65□□□□□ -0.22
AP003557.1-202ENST00000528978 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
AP003557.1-202ENST00000528978 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
AP003557.1-202ENST00000528978 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
AP003557.1-202ENST00000528978 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
AP003557.1-202ENST00000528978 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
AP003557.1-202ENST00000528978 SPDYE1Q8NFV5 336 aaPredicted RBP13.29□□□□□ -0.28
AP003557.1-202ENST00000528978 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
AP003557.1-202ENST00000528978 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
AP003557.1-202ENST00000528978 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
AP003557.1-202ENST00000528978 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
AP003557.1-202ENST00000528978 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
AP003557.1-202ENST00000528978 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
AP003557.1-202ENST00000528978 IFNLR1Q8IU57 520 aaPredicted RBP13.1□□□□□ -0.31
AP003557.1-202ENST00000528978 CREBZFQ9NS37 354 aa13.09□□□□□ -0.31
AP003557.1-202ENST00000528978 MIER1Q8N108 512 aa13.06□□□□□ -0.32
AP003557.1-202ENST00000528978 FXR2P51116 673 aaKnown RBP eCLIP13.05□□□□□ -0.32
AP003557.1-202ENST00000528978 CHADLQ6NUI6 762 aa13.04□□□□□ -0.32
AP003557.1-202ENST00000528978 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
AP003557.1-202ENST00000528978 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
AP003557.1-202ENST00000528978 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
AP003557.1-202ENST00000528978 PRKAR2AP13861 404 aaKnown RBP12.96□□□□□ -0.33
AP003557.1-202ENST00000528978 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
AP003557.1-202ENST00000528978 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
AP003557.1-202ENST00000528978 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
AP003557.1-202ENST00000528978 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
AP003557.1-202ENST00000528978 NUBP1P53384 320 aa12.82□□□□□ -0.36
AP003557.1-202ENST00000528978 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
AP003557.1-202ENST00000528978 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
AP003557.1-202ENST00000528978 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
AP003557.1-202ENST00000528978 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
AP003557.1-202ENST00000528978 PKD2Q13563 968 aa12.69□□□□□ -0.38
AP003557.1-202ENST00000528978 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
AP003557.1-202ENST00000528978 POTEHQ6S545 545 aa12.66□□□□□ -0.38
AP003557.1-202ENST00000528978 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
AP003557.1-202ENST00000528978 CIZ1Q9ULV3 898 aaPredicted RBP12.63□□□□□ -0.39
AP003557.1-202ENST00000528978 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
AP003557.1-202ENST00000528978 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
AP003557.1-202ENST00000528978 EVX2Q03828 476 aa12.6□□□□□ -0.39
AP003557.1-202ENST00000528978 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
AP003557.1-202ENST00000528978 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms