Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.2□□□□□ -1.42
BRCA2P51587 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BRCA2P51587 RPL21P129-201ENST00000491732 478 ntBASIC6.2□□□□□ -1.42
BRCA2P51587 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.2□□□□□ -1.42
BRCA2P51587 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.2□□□□□ -1.42
BRCA2P51587 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.2□□□□□ -1.42
BRCA2P51587 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.2□□□□□ -1.42
BRCA2P51587 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
BRCA2P51587 BX322650.1-201ENST00000332359 2143 ntBASIC6.2□□□□□ -1.42
BRCA2P51587 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA2P51587 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
BRCA2P51587 AL359955.1-201ENST00000455242 3275 ntBASIC6.2□□□□□ -1.42
BRCA2P51587 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.2□□□□□ -1.42
BRCA2P51587 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BRCA2P51587 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 MIR1193-201ENST00000408109 78 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCA2P51587 NIFKP3-201ENST00000417799 865 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 AL603882.1-201ENST00000463059 681 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.19□□□□□ -1.42
BRCA2P51587 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCA2P51587 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA2P51587 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA2P51587 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 LINC01616-201ENST00000561816 2280 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 PWAR1-201ENST00000624188 2414 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 TRY2P-201ENST00000448860 689 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 ACA64.4-201ENST00000459070 127 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 CCDC11P1-201ENST00000503137 1162 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCA2P51587 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
BRCA2P51587 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.19□□□□□ -1.42
BRCA2P51587 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.19□□□□□ -1.42
BRCA2P51587 AL627230.1-201ENST00000613077 211 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 AL591926.8-201ENST00000616876 211 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 AC012254.5-201ENST00000623573 478 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA2P51587 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
BRCA2P51587 AC019205.1-201ENST00000421830 730 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 AC004975.1-201ENST00000428733 208 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 RHOT1P3-201ENST00000436571 331 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCA2P51587 AL035690.1-201ENST00000490892 383 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA2P51587 AL031320.1-201ENST00000604177 357 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 MAPK10-344ENST00000641718 3746 ntBASIC6.19□□□□□ -1.42
BRCA2P51587 EDA-213ENST00000616899 4643 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA2P51587 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
BRCA2P51587 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA2P51587 AC092692.1-201ENST00000623625 2595 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 AL022237.1-201ENST00000446663 358 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 AC239367.2-201ENST00000447309 705 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
BRCA2P51587 AC025674.1-201ENST00000507074 324 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.18□□□□□ -1.42
BRCA2P51587 IGLV3-24-201ENST00000517477 197 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 MIR4311-201ENST00000580794 100 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 AL161637.1-201ENST00000622380 412 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 AC068724.3-201ENST00000625906 87 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.18□□□□□ -1.42
BRCA2P51587 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCA2P51587 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 AC026951.1-201ENST00000559530 2459 ntBASIC6.18□□□□□ -1.42
BRCA2P51587 SERPINA10-201ENST00000261994 4978 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA2P51587 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms