RNA–Protein interactions for RNA: ENST00000390449.3

TRAV21-201, Transcript of T cell receptor alpha variable 21, humanhuman

APPRIS P1 BASIC

Gene TRAV21, Length 343 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21-201ENST00000390449 CHIC1Q5VXU3 224 aa13.5□□□□□ -0.25
TRAV21-201ENST00000390449 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
TRAV21-201ENST00000390449 PHF23Q9BUL5 403 aaPredicted RBP11.77□□□□□ -0.53
TRAV21-201ENST00000390449 SENP3Q9H4L4 574 aaPredicted RBP11.64□□□□□ -0.55
TRAV21-201ENST00000390449 NISCHQ9Y2I1 1504 aa11.35□□□□□ -0.59
TRAV21-201ENST00000390449 ABCC9O60706 1549 aa11.19□□□□□ -0.62
TRAV21-201ENST00000390449 PLPPR3Q6T4P5 718 aa11.17□□□□□ -0.62
TRAV21-201ENST00000390449 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
TRAV21-201ENST00000390449 DNAJC5Q9H3Z4 198 aa10.71□□□□□ -0.69
TRAV21-201ENST00000390449 FOXD1Q16676 465 aa10.62□□□□□ -0.71
TRAV21-201ENST00000390449 ADRA2BP18089 450 aa10.4□□□□□ -0.74
TRAV21-201ENST00000390449 CCDC180Q9P1Z9 1646 aa10.35□□□□□ -0.75
TRAV21-201ENST00000390449 PPP6R1Q9UPN7 881 aa10.32□□□□□ -0.76
TRAV21-201ENST00000390449 PABPN1Q86U42 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
TRAV21-201ENST00000390449 RB1CC1Q8TDY2 1594 aa10.26□□□□□ -0.77
TRAV21-201ENST00000390449 PIAS4Q8N2W9 510 aaPredicted RBP10.2□□□□□ -0.78
TRAV21-201ENST00000390449 CECR2Q9BXF3 1484 aa10.15□□□□□ -0.78
TRAV21-201ENST00000390449 TRIM41Q8WV44 630 aa10.11□□□□□ -0.79
TRAV21-201ENST00000390449 CC2D2AQ9P2K1 1620 aa10.01□□□□□ -0.81
TRAV21-201ENST00000390449 NACADO15069 1562 aa9.97□□□□□ -0.81
TRAV21-201ENST00000390449 UNC13AQ9UPW8 1703 aa9.93□□□□□ -0.82
TRAV21-201ENST00000390449 BICRAQ9NZM4 1560 aa9.93□□□□□ -0.82
TRAV21-201ENST00000390449 DCAF8L2P0C7V8 631 aa9.92□□□□□ -0.82
TRAV21-201ENST00000390449 CUX2O14529 1486 aa9.91□□□□□ -0.82
TRAV21-201ENST00000390449 MSH5O43196 834 aa9.9□□□□□ -0.82
TRAV21-201ENST00000390449 EIF4G1Q04637 1599 aaKnown RBP9.81□□□□□ -0.84
TRAV21-201ENST00000390449 PPP4R3CPQ6ZMV5 832 aa9.8□□□□□ -0.84
TRAV21-201ENST00000390449 ERCC6Q03468 1493 aa9.79□□□□□ -0.84
TRAV21-201ENST00000390449 NCBP3Q53F19 620 aaKnown RBP9.78□□□□□ -0.84
TRAV21-201ENST00000390449 SCAF1Q9H7N4 1312 aaKnown RBP9.78□□□□□ -0.84
TRAV21-201ENST00000390449 KCNA4P22459 653 aa9.74□□□□□ -0.85
TRAV21-201ENST00000390449 SHROOM4Q9ULL8 1493 aa9.73□□□□□ -0.85
TRAV21-201ENST00000390449 MYO15BQ96JP2 1530 aa9.61□□□□□ -0.87
TRAV21-201ENST00000390449 CNKSR2Q8WXI2 1034 aa9.53□□□□□ -0.88
TRAV21-201ENST00000390449 SCRIBQ14160 1630 aa9.51□□□□□ -0.89
TRAV21-201ENST00000390449 SLC4A1APQ9BWU0 796 aaKnown RBP9.44□□□□□ -0.9
TRAV21-201ENST00000390449 DCAF1Q9Y4B6 1507 aa9.43□□□□□ -0.9
TRAV21-201ENST00000390449 TRHP20396 242 aaPredicted RBP9.43□□□□□ -0.9
TRAV21-201ENST00000390449 NPM3O75607 178 aaKnown RBP9.41□□□□□ -0.9
TRAV21-201ENST00000390449 THOC2Q8NI27 1593 aaKnown RBP9.4□□□□□ -0.9
TRAV21-201ENST00000390449 ILDR1Q86SU0 546 aaPredicted RBP9.39□□□□□ -0.91
TRAV21-201ENST00000390449 EHMT2Q96KQ7 1210 aa9.39□□□□□ -0.91
TRAV21-201ENST00000390449 SMARCA2P51531 1590 aa9.38□□□□□ -0.91
TRAV21-201ENST00000390449 NESP48681 1621 aa9.37□□□□□ -0.91
TRAV21-201ENST00000390449 ZCCHC6Q5VYS8 1495 aaKnown RBP9.36□□□□□ -0.91
TRAV21-201ENST00000390449 BAZ1AQ9NRL2 1556 aaPredicted RBP9.35□□□□□ -0.91
TRAV21-201ENST00000390449 MAPK8IP2Q13387 824 aaPredicted RBP9.33□□□□□ -0.92
TRAV21-201ENST00000390449 OSCARQ8IYS5 282 aa9.32□□□□□ -0.92
TRAV21-201ENST00000390449 RIMBP3CA6NJZ7 1639 aa9.3□□□□□ -0.92
TRAV21-201ENST00000390449 RIMBP3BA6NNM3 1639 aa9.3□□□□□ -0.92
TRAV21-201ENST00000390449 RIMBP3Q9UFD9 1639 aa9.3□□□□□ -0.92
TRAV21-201ENST00000390449 RNF216Q9NWF9 866 aaPredicted RBP9.27□□□□□ -0.93
TRAV21-201ENST00000390449 DMRT2Q9Y5R5 561 aa9.24□□□□□ -0.93
TRAV21-201ENST00000390449 ARHGEF11O15085 1522 aa9.21□□□□□ -0.93
TRAV21-201ENST00000390449 CYB5RLQ6IPT4 315 aa9.21□□□□□ -0.94
TRAV21-201ENST00000390449 KIF21AQ7Z4S6 1674 aa9.2□□□□□ -0.94
TRAV21-201ENST00000390449 NCAPD3P42695 1498 aa9.19□□□□□ -0.94
TRAV21-201ENST00000390449 PDS5BQ9NTI5 1447 aa9.15□□□□□ -0.94
TRAV21-201ENST00000390449 LAMC3Q9Y6N6 1575 aa9.14□□□□□ -0.95
TRAV21-201ENST00000390449 MRC2Q9UBG0 1479 aa9.14□□□□□ -0.95
TRAV21-201ENST00000390449 HOXD11P31277 338 aaPredicted RBP9.11□□□□□ -0.95
TRAV21-201ENST00000390449 WDR62O43379 1518 aa9.1□□□□□ -0.95
TRAV21-201ENST00000390449 HMGXB3Q12766 1538 aa9.1□□□□□ -0.95
TRAV21-201ENST00000390449 ATAD2BQ9ULI0 1458 aa9.09□□□□□ -0.95
TRAV21-201ENST00000390449 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
TRAV21-201ENST00000390449 CSRNP3Q8WYN3 585 aa9.06□□□□□ -0.96
TRAV21-201ENST00000390449 BAZ1BQ9UIG0 1483 aaKnown RBP9.03□□□□□ -0.96
TRAV21-201ENST00000390449 FOXD4L1Q9NU39 408 aa9.01□□□□□ -0.97
TRAV21-201ENST00000390449 DCAF8L1A6NGE4 600 aa9□□□□□ -0.97
TRAV21-201ENST00000390449 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.97
TRAV21-201ENST00000390449 LMTK3Q96Q04 1460 aa8.94□□□□□ -0.98
TRAV21-201ENST00000390449 CADPSQ9ULU8 1353 aa8.91□□□□□ -0.98
TRAV21-201ENST00000390449 SMARCA4P51532 1647 aa8.91□□□□□ -0.98
TRAV21-201ENST00000390449 RSF1Q96T23 1441 aaPredicted RBP8.88□□□□□ -0.99
TRAV21-201ENST00000390449 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
TRAV21-201ENST00000390449 FBLN2P98095 1184 aa8.86□□□□□ -0.99
TRAV21-201ENST00000390449 PEG3Q9GZU2 1588 aa8.86□□□□□ -0.99
TRAV21-201ENST00000390449 ZBTB22O15209 634 aa8.85□□□□□ -0.99
TRAV21-201ENST00000390449 FBXO41Q8TF61 875 aa8.85□□□□□ -0.99
TRAV21-201ENST00000390449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRAV21-201ENST00000390449 ZNF608Q9ULD9 1512 aaPredicted RBP8.85□□□□□ -0.99
TRAV21-201ENST00000390449 ERCC6L2Q5T890 1561 aa8.83□□□□□ -1
TRAV21-201ENST00000390449 KDM4FA0A1W2PPD8 638 aa8.83□□□□□ -1
TRAV21-201ENST00000390449 SOCS7O14512 581 aa8.82□□□□□ -1
TRAV21-201ENST00000390449 CHD1O14646 1710 aa8.82□□□□□ -1
TRAV21-201ENST00000390449 URB2Q14146 1524 aaKnown RBP8.81□□□□□ -1
TRAV21-201ENST00000390449 MYCNP04198 464 aaPredicted RBP8.8□□□□□ -1
TRAV21-201ENST00000390449 HECW2Q9P2P5 1572 aa8.78□□□□□ -1
TRAV21-201ENST00000390449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.78□□□□□ -1
TRAV21-201ENST00000390449 HNRNPUL2Q1KMD3 747 aaKnown RBP8.78□□□□□ -1
TRAV21-201ENST00000390449 EIF4G3O43432 1585 aaKnown RBP8.78□□□□□ -1
TRAV21-201ENST00000390449 IFT140Q96RY7 1462 aa8.77□□□□□ -1
TRAV21-201ENST00000390449 SLC4A2P04920 1241 aa8.76□□□□□ -1.01
TRAV21-201ENST00000390449 DISP3Q9P2K9 1392 aa8.74□□□□□ -1.01
TRAV21-201ENST00000390449 ILDR2Q71H61 639 aa8.74□□□□□ -1.01
TRAV21-201ENST00000390449 MROH2BQ7Z745 1585 aa8.72□□□□□ -1.01
TRAV21-201ENST00000390449 ATXN8OSP0DMR3 200 aa8.71□□□□□ -1.02
TRAV21-201ENST00000390449 GAPVD1Q14C86 1478 aa8.7□□□□□ -1.02
TRAV21-201ENST00000390449 APLP2Q06481 763 aa8.69□□□□□ -1.02
TRAV21-201ENST00000390449 SAMD1Q6SPF0 538 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms