Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXA2O43364 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXA2O43364 LYARP1-201ENST00000436977 1501 ntBASIC8.48□□□□□ -1.05
HOXA2O43364 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.48□□□□□ -1.05
HOXA2O43364 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.48□□□□□ -1.05
HOXA2O43364 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.48□□□□□ -1.05
HOXA2O43364 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.48□□□□□ -1.05
HOXA2O43364 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXA2O43364 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
HOXA2O43364 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
HOXA2O43364 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC8.47□□□□□ -1.05
HOXA2O43364 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 AC104083.1-201ENST00000569449 2615 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AL049634.1-201ENST00000453770 1720 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXA2O43364 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 Y_RNA.89-201ENST00000363031 102 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 RNU6-297P-201ENST00000384636 107 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXA2O43364 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXA2O43364 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXA2O43364 SEPT7P5-201ENST00000434048 306 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.47□□□□□ -1.05
HOXA2O43364 PA2G4P6-201ENST00000438325 1197 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AL022238.1-201ENST00000442557 355 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 RPL39P6-201ENST00000448289 150 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AL033528.1-201ENST00000453780 140 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 PMCHL2-203ENST00000457791 237 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.47□□□□□ -1.05
HOXA2O43364 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC8.47□□□□□ -1.05
HOXA2O43364 AC104849.1-201ENST00000462623 405 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.47□□□□□ -1.05
HOXA2O43364 OR52A4P-201ENST00000472867 958 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 RPL34P33-201ENST00000486062 334 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 RN7SL182P-201ENST00000496499 300 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 AC019235.1-201ENST00000503847 207 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AC018710.1-201ENST00000506509 158 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 OR5M14P-201ENST00000506803 618 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXA2O43364 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXA2O43364 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXA2O43364 RN7SKP242-201ENST00000515967 289 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXA2O43364 OR4C2P-201ENST00000530855 1064 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXA2O43364 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXA2O43364 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXA2O43364 AC090971.3-201ENST00000557871 1041 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 AC087477.6-201ENST00000559595 843 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXA2O43364 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.47□□□□□ -1.05
HOXA2O43364 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.47□□□□□ -1.05
HOXA2O43364 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.47□□□□□ -1.05
HOXA2O43364 AC027243.2-201ENST00000602530 724 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AL161729.3-201ENST00000603533 673 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 AC015871.5-202ENST00000623252 701 ntBASIC8.47□□□□□ -1.05
HOXA2O43364 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXA2O43364 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.47□□□□□ -1.05
HOXA2O43364 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXA2O43364 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
HOXA2O43364 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXA2O43364 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXA2O43364 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC8.47□□□□□ -1.05
HOXA2O43364 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC8.46□□□□□ -1.05
HOXA2O43364 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
HOXA2O43364 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
HOXA2O43364 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
HOXA2O43364 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
HOXA2O43364 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
HOXA2O43364 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
HOXA2O43364 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.46□□□□□ -1.05
HOXA2O43364 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC8.46□□□□□ -1.05
HOXA2O43364 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
HOXA2O43364 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
HOXA2O43364 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.46□□□□□ -1.05
HOXA2O43364 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC8.46□□□□□ -1.05
HOXA2O43364 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 ENSAP3-201ENST00000312710 333 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
HOXA2O43364 RNA5SP389-201ENST00000362610 115 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 RNA5SP226-201ENST00000362653 115 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms