Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 LINC01616-201ENST00000561816 2280 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN18P56856 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLDN18P56856 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN18P56856 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLDN18P56856 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 AC245096.1-201ENST00000413104 546 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AL512593.1-201ENST00000444758 779 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 FTLP8-201ENST00000446770 267 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN18P56856 AC103563.5-201ENST00000455643 364 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AC073594.1-201ENST00000462065 364 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 GOLGA5P1-201ENST00000507317 980 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 RN7SKP238-201ENST00000516483 249 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 RNA5SP340-201ENST00000517132 107 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 OR6M2P-201ENST00000529831 871 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AP000619.2-201ENST00000546014 969 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 HMGN2P47-201ENST00000559378 272 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN18P56856 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.5□□□□□ -1.53
CLDN18P56856 AL138895.2-201ENST00000603019 178 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AC141002.1-201ENST00000607025 279 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AL359742.1-201ENST00000622497 540 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AC003992.1-201ENST00000635364 557 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 AL359091.1-201ENST00000449048 1734 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 AC096921.2-201ENST00000561507 1916 ntBASIC5.5□□□□□ -1.53
CLDN18P56856 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
CLDN18P56856 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CLDN18P56856 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN18P56856 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLDN18P56856 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN18P56856 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN18P56856 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 GTF2IP4-201ENST00000453092 2054 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 MTCO1P28-201ENST00000574177 1528 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CLDN18P56856 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 LCN1P2-201ENST00000372030 223 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 AL096829.1-201ENST00000413677 457 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN18P56856 KCTD9P1-201ENST00000430462 1167 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 TRIM60P16-201ENST00000444048 694 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 ZNF619P1-201ENST00000446539 752 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.49□□□□□ -1.53
CLDN18P56856 RN7SL165P-201ENST00000477476 291 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 AC025458.1-201ENST00000506046 166 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN18P56856 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN18P56856 RNU6-1334P-201ENST00000516032 105 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN18P56856 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN18P56856 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN18P56856 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN18P56856 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.49□□□□□ -1.53
CLDN18P56856 RNU4ATAC-201ENST00000580972 127 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN18P56856 AC009237.12-201ENST00000604755 742 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 AL645933.2-201ENST00000606743 1207 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 AC108865.2-201ENST00000606881 432 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
CLDN18P56856 CASC19-238ENST00000641523 1558 ntBASIC5.49□□□□□ -1.53
CLDN18P56856 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CLDN18P56856 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.49□□□□□ -1.53
CLDN18P56856 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN18P56856 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CLDN18P56856 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN18P56856 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN18P56856 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms