RNA–Protein interactions for RNA: ENST00000420732.6

MS4A6A-202, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 1 (best) BASIC

Gene MS4A6A, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-202ENST00000420732 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
MS4A6A-202ENST00000420732 CHIC1Q5VXU3 224 aa19.69■□□□□ 0.74
MS4A6A-202ENST00000420732 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
MS4A6A-202ENST00000420732 PHF23Q9BUL5 403 aaPredicted RBP17.48■□□□□ 0.39
MS4A6A-202ENST00000420732 FOXD1Q16676 465 aa16.52■□□□□ 0.24
MS4A6A-202ENST00000420732 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
MS4A6A-202ENST00000420732 MSH5O43196 834 aa15.53■□□□□ 0.08
MS4A6A-202ENST00000420732 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
MS4A6A-202ENST00000420732 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
MS4A6A-202ENST00000420732 ADRA2BP18089 450 aa15.35■□□□□ 0.05
MS4A6A-202ENST00000420732 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
MS4A6A-202ENST00000420732 NISCHQ9Y2I1 1504 aa14.53□□□□□ -0.08
MS4A6A-202ENST00000420732 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
MS4A6A-202ENST00000420732 SCAF1Q9H7N4 1312 aaKnown RBP14.18□□□□□ -0.14
MS4A6A-202ENST00000420732 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
MS4A6A-202ENST00000420732 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
MS4A6A-202ENST00000420732 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
MS4A6A-202ENST00000420732 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
MS4A6A-202ENST00000420732 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
MS4A6A-202ENST00000420732 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
MS4A6A-202ENST00000420732 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
MS4A6A-202ENST00000420732 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
MS4A6A-202ENST00000420732 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
MS4A6A-202ENST00000420732 ABCC9O60706 1549 aa13.17□□□□□ -0.3
MS4A6A-202ENST00000420732 DNAJC5BQ9UF47 199 aa13.14□□□□□ -0.31
MS4A6A-202ENST00000420732 C1QBPQ07021 282 aaKnown RBP13.06□□□□□ -0.32
MS4A6A-202ENST00000420732 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
MS4A6A-202ENST00000420732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.93□□□□□ -0.34
MS4A6A-202ENST00000420732 CCDC180Q9P1Z9 1646 aa12.77□□□□□ -0.37
MS4A6A-202ENST00000420732 KCNA4P22459 653 aa12.75□□□□□ -0.37
MS4A6A-202ENST00000420732 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
MS4A6A-202ENST00000420732 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
MS4A6A-202ENST00000420732 CAPN15O75808 1086 aa12.43□□□□□ -0.42
MS4A6A-202ENST00000420732 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
MS4A6A-202ENST00000420732 APLP2Q06481 763 aa12.41□□□□□ -0.42
MS4A6A-202ENST00000420732 DNAJC5Q9H3Z4 198 aa12.41□□□□□ -0.42
MS4A6A-202ENST00000420732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
MS4A6A-202ENST00000420732 HNRNPUL2Q1KMD3 747 aaKnown RBP12.37□□□□□ -0.43
MS4A6A-202ENST00000420732 DSG3P32926 999 aa12.33□□□□□ -0.44
MS4A6A-202ENST00000420732 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
MS4A6A-202ENST00000420732 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
MS4A6A-202ENST00000420732 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
MS4A6A-202ENST00000420732 ZCCHC6Q5VYS8 1495 aaKnown RBP12.19□□□□□ -0.46
MS4A6A-202ENST00000420732 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
MS4A6A-202ENST00000420732 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
MS4A6A-202ENST00000420732 ABCB7O75027 752 aa12.12□□□□□ -0.47
MS4A6A-202ENST00000420732 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
MS4A6A-202ENST00000420732 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
MS4A6A-202ENST00000420732 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
MS4A6A-202ENST00000420732 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
MS4A6A-202ENST00000420732 BICRAQ9NZM4 1560 aa11.97□□□□□ -0.49
MS4A6A-202ENST00000420732 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
MS4A6A-202ENST00000420732 POTEHQ6S545 545 aa11.93□□□□□ -0.5
MS4A6A-202ENST00000420732 UNC13AQ9UPW8 1703 aa11.93□□□□□ -0.5
MS4A6A-202ENST00000420732 CECR2Q9BXF3 1484 aa11.91□□□□□ -0.5
MS4A6A-202ENST00000420732 NACADO15069 1562 aa11.91□□□□□ -0.5
MS4A6A-202ENST00000420732 POLA2Q14181 598 aa11.89□□□□□ -0.51
MS4A6A-202ENST00000420732 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
MS4A6A-202ENST00000420732 CC2D2AQ9P2K1 1620 aa11.85□□□□□ -0.51
MS4A6A-202ENST00000420732 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
MS4A6A-202ENST00000420732 ZBTB12Q9Y330 459 aaPredicted RBP11.76□□□□□ -0.53
MS4A6A-202ENST00000420732 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.53
MS4A6A-202ENST00000420732 ZBTB22O15209 634 aa11.68□□□□□ -0.54
MS4A6A-202ENST00000420732 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
MS4A6A-202ENST00000420732 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
MS4A6A-202ENST00000420732 SHROOM4Q9ULL8 1493 aa11.59□□□□□ -0.55
MS4A6A-202ENST00000420732 CUX2O14529 1486 aa11.57□□□□□ -0.56
MS4A6A-202ENST00000420732 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
MS4A6A-202ENST00000420732 SCRIBQ14160 1630 aa11.56□□□□□ -0.56
MS4A6A-202ENST00000420732 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
MS4A6A-202ENST00000420732 TRIM41Q8WV44 630 aa11.51□□□□□ -0.57
MS4A6A-202ENST00000420732 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
MS4A6A-202ENST00000420732 FBLN2P98095 1184 aa11.43□□□□□ -0.58
MS4A6A-202ENST00000420732 REM2Q8IYK8 340 aaPredicted RBP11.41□□□□□ -0.58
MS4A6A-202ENST00000420732 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
MS4A6A-202ENST00000420732 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
MS4A6A-202ENST00000420732 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
MS4A6A-202ENST00000420732 ERCC6Q03468 1493 aa11.32□□□□□ -0.6
MS4A6A-202ENST00000420732 PITPNM1O00562 1244 aa11.27□□□□□ -0.61
MS4A6A-202ENST00000420732 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
MS4A6A-202ENST00000420732 RSF1Q96T23 1441 aaPredicted RBP11.2□□□□□ -0.62
MS4A6A-202ENST00000420732 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
MS4A6A-202ENST00000420732 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
MS4A6A-202ENST00000420732 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
MS4A6A-202ENST00000420732 MROH2BQ7Z745 1585 aa11.19□□□□□ -0.62
MS4A6A-202ENST00000420732 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
MS4A6A-202ENST00000420732 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
MS4A6A-202ENST00000420732 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
MS4A6A-202ENST00000420732 NESP48681 1621 aa11.17□□□□□ -0.62
MS4A6A-202ENST00000420732 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
MS4A6A-202ENST00000420732 PEG3Q9GZU2 1588 aa11.16□□□□□ -0.62
MS4A6A-202ENST00000420732 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
MS4A6A-202ENST00000420732 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
MS4A6A-202ENST00000420732 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
MS4A6A-202ENST00000420732 HAX1O00165 279 aa11.09□□□□□ -0.63
MS4A6A-202ENST00000420732 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
MS4A6A-202ENST00000420732 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
MS4A6A-202ENST00000420732 EVX2Q03828 476 aa11.06□□□□□ -0.64
MS4A6A-202ENST00000420732 WIZO95785 1651 aa11.05□□□□□ -0.64
MS4A6A-202ENST00000420732 ATAD2BQ9ULI0 1458 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 396.1 ms