Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL022237.1-201ENST00000446663 358 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 AC079841.1-201ENST00000481228 950 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 AC072052.1-201ENST00000496556 306 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 RN7SKP66-201ENST00000516681 231 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 HNRNPCP1-201ENST00000556181 766 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.73□□□□□ -1.17
ABCA3Q99758 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.73□□□□□ -1.17
ABCA3Q99758 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.73□□□□□ -1.17
ABCA3Q99758 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.73□□□□□ -1.17
ABCA3Q99758 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.73□□□□□ -1.17
ABCA3Q99758 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.73□□□□□ -1.17
ABCA3Q99758 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
ABCA3Q99758 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.73□□□□□ -1.17
ABCA3Q99758 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ABCA3Q99758 AL645733.1-201ENST00000402250 217 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 MYL6P5-201ENST00000412707 459 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 RAB28P2-201ENST00000454299 641 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 AC099521.1-201ENST00000482557 334 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.72□□□□□ -1.17
ABCA3Q99758 AL049779.2-201ENST00000553847 315 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.72□□□□□ -1.17
ABCA3Q99758 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ABCA3Q99758 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ABCA3Q99758 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ABCA3Q99758 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ABCA3Q99758 AL034549.2-201ENST00000618285 3373 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ABCA3Q99758 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.72□□□□□ -1.17
ABCA3Q99758 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ABCA3Q99758 PA2G4P6-201ENST00000438325 1197 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 RPS23P9-201ENST00000448848 438 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 AL672167.3-201ENST00000465951 960 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.72□□□□□ -1.17
ABCA3Q99758 AC083982.1-201ENST00000485679 344 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 MIR4311-201ENST00000580794 100 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 AC012557.1-201ENST00000607115 611 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 AC133644.2-201ENST00000608142 540 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 AC008115.3-201ENST00000614874 549 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 uc_338.18-201ENST00000615451 175 ntBASIC7.72□□□□□ -1.17
ABCA3Q99758 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ABCA3Q99758 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ABCA3Q99758 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.71□□□□□ -1.17
ABCA3Q99758 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.71□□□□□ -1.17
ABCA3Q99758 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
ABCA3Q99758 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
ABCA3Q99758 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.71□□□□□ -1.17
ABCA3Q99758 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
ABCA3Q99758 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.71□□□□□ -1.17
ABCA3Q99758 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.71□□□□□ -1.17
ABCA3Q99758 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
ABCA3Q99758 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.71□□□□□ -1.17
ABCA3Q99758 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.71□□□□□ -1.17
ABCA3Q99758 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
ABCA3Q99758 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
ABCA3Q99758 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.71□□□□□ -1.18
ABCA3Q99758 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 GNAS-202ENST00000306090 477 ntTSL 5 BASIC7.71□□□□□ -1.18
ABCA3Q99758 RNU1-24P-201ENST00000364285 165 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 MIR141-201ENST00000384975 95 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 AL139128.1-201ENST00000413921 941 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 VDAC1P2-201ENST00000423609 850 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 VDAC1P6-201ENST00000430062 855 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.71□□□□□ -1.18
ABCA3Q99758 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.71□□□□□ -1.18
ABCA3Q99758 AC015864.1-201ENST00000496512 544 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.71□□□□□ -1.18
ABCA3Q99758 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.71□□□□□ -1.18
ABCA3Q99758 GSTP1P1-201ENST00000548078 319 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 MIR4330-201ENST00000579077 105 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 MIR378J-201ENST00000611988 109 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 AC025574.2-201ENST00000615621 514 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 BX322650.1-201ENST00000332359 2143 ntBASIC7.71□□□□□ -1.18
ABCA3Q99758 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.71□□□□□ -1.18
ABCA3Q99758 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.71□□□□□ -1.18
ABCA3Q99758 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
ABCA3Q99758 AC011379.1-201ENST00000508713 3025 ntBASIC7.7□□□□□ -1.18
ABCA3Q99758 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ABCA3Q99758 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ABCA3Q99758 AC104447.1-201ENST00000624214 2124 ntBASIC7.7□□□□□ -1.18
ABCA3Q99758 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
ABCA3Q99758 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
ABCA3Q99758 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms