Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC10.39□□□□□ -0.75
SMARCA4P51532 AL049779.2-201ENST00000553847 315 ntBASIC10.39□□□□□ -0.75
SMARCA4P51532 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC10.39□□□□□ -0.75
SMARCA4P51532 MRPS21P7-201ENST00000566937 238 ntBASIC10.39□□□□□ -0.75
SMARCA4P51532 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
SMARCA4P51532 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
SMARCA4P51532 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
SMARCA4P51532 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC10.38□□□□□ -0.75
SMARCA4P51532 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC10.38□□□□□ -0.75
SMARCA4P51532 RNA5SP335-201ENST00000363817 110 ntBASIC10.38□□□□□ -0.75
SMARCA4P51532 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC10.38□□□□□ -0.75
SMARCA4P51532 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC10.38□□□□□ -0.75
SMARCA4P51532 VN1R54P-201ENST00000435210 1049 ntBASIC10.38□□□□□ -0.75
SMARCA4P51532 AL645937.3-201ENST00000453647 936 ntBASIC10.38□□□□□ -0.75
SMARCA4P51532 RPL23AP40-201ENST00000487630 390 ntBASIC10.38□□□□□ -0.75
SMARCA4P51532 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC10.38□□□□□ -0.75
SMARCA4P51532 AC024589.2-201ENST00000605642 1294 ntBASIC10.38□□□□□ -0.75
SMARCA4P51532 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SMARCA4P51532 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMARCA4P51532 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC10.38□□□□□ -0.75
SMARCA4P51532 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SMARCA4P51532 ZNF658B-201ENST00000602828 3408 ntBASIC10.38□□□□□ -0.75
SMARCA4P51532 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC10.38□□□□□ -0.75
SMARCA4P51532 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SMARCA4P51532 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 Z82209.2-201ENST00000623410 2012 ntBASIC10.37□□□□□ -0.75
SMARCA4P51532 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC10.37□□□□□ -0.75
SMARCA4P51532 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 LINC01616-201ENST00000561816 2280 ntBASIC10.37□□□□□ -0.75
SMARCA4P51532 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SMARCA4P51532 AC005294.1-201ENST00000355509 281 ntBASIC10.37□□□□□ -0.75
SMARCA4P51532 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SMARCA4P51532 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SMARCA4P51532 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC10.37□□□□□ -0.75
SMARCA4P51532 RAB28P2-201ENST00000454299 641 ntBASIC10.37□□□□□ -0.75
SMARCA4P51532 RNA5SP228-201ENST00000516232 133 ntBASIC10.37□□□□□ -0.75
SMARCA4P51532 AC022832.1-201ENST00000530718 645 ntBASIC10.37□□□□□ -0.75
SMARCA4P51532 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SMARCA4P51532 AC010245.2-201ENST00000606908 1167 ntBASIC10.37□□□□□ -0.75
SMARCA4P51532 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC10.37□□□□□ -0.75
SMARCA4P51532 AC119674.1-217ENST00000641942 1086 ntBASIC10.37□□□□□ -0.75
SMARCA4P51532 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 NCOA4P3-201ENST00000513203 1877 ntBASIC10.37□□□□□ -0.75
SMARCA4P51532 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SMARCA4P51532 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC10.37□□□□□ -0.75
SMARCA4P51532 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SMARCA4P51532 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
SMARCA4P51532 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC10.37□□□□□ -0.75
SMARCA4P51532 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SMARCA4P51532 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
SMARCA4P51532 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SMARCA4P51532 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SMARCA4P51532 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC10.36□□□□□ -0.75
SMARCA4P51532 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA4P51532 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA4P51532 HIGD1AP8-201ENST00000453927 274 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 CCDC11P1-201ENST00000503137 1162 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC10.36□□□□□ -0.75
SMARCA4P51532 AC021678.3-201ENST00000517893 476 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC10.36□□□□□ -0.75
SMARCA4P51532 OR1F2P-201ENST00000570470 933 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 MIR3691-201ENST00000578066 90 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC10.36□□□□□ -0.75
SMARCA4P51532 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC10.36□□□□□ -0.75
SMARCA4P51532 AP002505.2-201ENST00000623585 696 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC10.36□□□□□ -0.75
SMARCA4P51532 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA4P51532 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA4P51532 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC10.36□□□□□ -0.75
SMARCA4P51532 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC10.36□□□□□ -0.75
SMARCA4P51532 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
SMARCA4P51532 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
SMARCA4P51532 THAP12P9-201ENST00000503971 2360 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 CASC19-205ENST00000641013 1411 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA4P51532 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA4P51532 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA4P51532 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
SMARCA4P51532 RMRPP5-201ENST00000411156 267 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 RPS26P13-201ENST00000419030 330 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 AC023141.8-201ENST00000442554 208 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC10.36□□□□□ -0.75
SMARCA4P51532 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC10.36□□□□□ -0.75
SMARCA4P51532 AC099521.1-201ENST00000482557 334 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC10.36□□□□□ -0.75
SMARCA4P51532 HIGD1AP5-201ENST00000529959 259 ntBASIC10.36□□□□□ -0.75
SMARCA4P51532 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC10.36□□□□□ -0.75
SMARCA4P51532 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC10.36□□□□□ -0.75
SMARCA4P51532 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
SMARCA4P51532 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms