Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC139426.3-201ENST00000605648 2059 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AC009948.5-201ENST00000624360 4406 ntBASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
PCDHGA11Q9Y5H2 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC106872.5-201ENST00000508856 1416 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 Y_RNA.9-201ENST00000362354 101 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 RNU6-1339P-201ENST00000363574 91 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 RNU6-452P-201ENST00000384406 107 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 PRELID1P2-201ENST00000407805 396 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 U3.34-201ENST00000408198 212 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AL139413.1-201ENST00000421309 217 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 FBP2P1-202ENST00000424473 530 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC233728.2-201ENST00000425348 757 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 MTCO2P11-201ENST00000431069 680 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 GAPDHP34-201ENST00000432112 823 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC092427.1-201ENST00000439177 601 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AP1B1P1-202ENST00000448124 191 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 NFU1P2-201ENST00000448700 469 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 MTND6P6-201ENST00000478031 263 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC073522.1-201ENST00000483312 377 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC079382.1-201ENST00000493346 557 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AP000435.1-201ENST00000528539 496 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SL155P-201ENST00000581538 263 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC024451.4-201ENST00000602578 752 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AL121757.2-201ENST00000611223 313 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AL353726.1-201ENST00000614041 1000 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC010133.1-201ENST00000615809 842 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 RN7SL113P-201ENST00000619959 299 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC004836.1-201ENST00000623032 634 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AP005264.7-201ENST00000625003 745 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 MIR3688-2-201ENST00000636963 87 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 Z99129.4-201ENST00000624649 2435 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 SMG1P1-202ENST00000309865 4223 ntBASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHGA11Q9Y5H2 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms