RNA–Protein interactions for RNA: ENST00000515090.5

GPM6A-221, Transcript of glycoprotein M6A, humanhuman

TSL 2 BASIC

Gene GPM6A, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6A-221ENST00000515090 AEBP2Q6ZN18 517 aaPredicted RBP25.25■■□□□ 1.63
GPM6A-221ENST00000515090 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
GPM6A-221ENST00000515090 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
GPM6A-221ENST00000515090 PHF23Q9BUL5 403 aaPredicted RBP21.25■□□□□ 0.99
GPM6A-221ENST00000515090 FOXD1Q16676 465 aa20.2■□□□□ 0.82
GPM6A-221ENST00000515090 NISCHQ9Y2I1 1504 aa19.88■□□□□ 0.77
GPM6A-221ENST00000515090 POTEDQ86YR6 584 aa19.46■□□□□ 0.71
GPM6A-221ENST00000515090 MSH5O43196 834 aa19.04■□□□□ 0.64
GPM6A-221ENST00000515090 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
GPM6A-221ENST00000515090 PIAS4Q8N2W9 510 aaPredicted RBP18.74■□□□□ 0.59
GPM6A-221ENST00000515090 PPP6R1Q9UPN7 881 aa18.54■□□□□ 0.56
GPM6A-221ENST00000515090 ADRA2BP18089 450 aa18.47■□□□□ 0.55
GPM6A-221ENST00000515090 ABCC9O60706 1549 aa17.74■□□□□ 0.43
GPM6A-221ENST00000515090 CCDC180Q9P1Z9 1646 aa17.69■□□□□ 0.42
GPM6A-221ENST00000515090 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
GPM6A-221ENST00000515090 DMRT2Q9Y5R5 561 aa17.04■□□□□ 0.32
GPM6A-221ENST00000515090 SCAF1Q9H7N4 1312 aaKnown RBP17■□□□□ 0.31
GPM6A-221ENST00000515090 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
GPM6A-221ENST00000515090 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
GPM6A-221ENST00000515090 NACADO15069 1562 aa16.72■□□□□ 0.27
GPM6A-221ENST00000515090 CACNB1Q02641 598 aaPredicted RBP16.68■□□□□ 0.26
GPM6A-221ENST00000515090 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
GPM6A-221ENST00000515090 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
GPM6A-221ENST00000515090 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
GPM6A-221ENST00000515090 MYO15BQ96JP2 1530 aa16.48■□□□□ 0.23
GPM6A-221ENST00000515090 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
GPM6A-221ENST00000515090 BICRAQ9NZM4 1560 aa16.44■□□□□ 0.22
GPM6A-221ENST00000515090 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
GPM6A-221ENST00000515090 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
GPM6A-221ENST00000515090 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
GPM6A-221ENST00000515090 HOXD11P31277 338 aaPredicted RBP16.28■□□□□ 0.2
GPM6A-221ENST00000515090 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
GPM6A-221ENST00000515090 RNF39Q9H2S5 420 aa16.22■□□□□ 0.19
GPM6A-221ENST00000515090 CNKSR2Q8WXI2 1034 aa16.18■□□□□ 0.18
GPM6A-221ENST00000515090 RNF216Q9NWF9 866 aaPredicted RBP16.09■□□□□ 0.17
GPM6A-221ENST00000515090 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
GPM6A-221ENST00000515090 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
GPM6A-221ENST00000515090 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
GPM6A-221ENST00000515090 C1QBPQ07021 282 aaKnown RBP15.94■□□□□ 0.14
GPM6A-221ENST00000515090 CECR2Q9BXF3 1484 aa15.92■□□□□ 0.14
GPM6A-221ENST00000515090 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
GPM6A-221ENST00000515090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.56■□□□□ 0.08
GPM6A-221ENST00000515090 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
GPM6A-221ENST00000515090 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
GPM6A-221ENST00000515090 SMARCA4P51532 1647 aa15.47■□□□□ 0.07
GPM6A-221ENST00000515090 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
GPM6A-221ENST00000515090 MROH2BQ7Z745 1585 aa15.38■□□□□ 0.05
GPM6A-221ENST00000515090 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
GPM6A-221ENST00000515090 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
GPM6A-221ENST00000515090 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
GPM6A-221ENST00000515090 NESP48681 1621 aa15.32■□□□□ 0.04
GPM6A-221ENST00000515090 BAZ1BQ9UIG0 1483 aaKnown RBP15.29■□□□□ 0.04
GPM6A-221ENST00000515090 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
GPM6A-221ENST00000515090 ERCC6Q03468 1493 aa15.21■□□□□ 0.03
GPM6A-221ENST00000515090 WIZO95785 1651 aa15.2■□□□□ 0.02
GPM6A-221ENST00000515090 POTEHQ6S545 545 aa15.15■□□□□ 0.02
GPM6A-221ENST00000515090 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
GPM6A-221ENST00000515090 CUX2O14529 1486 aa15.12■□□□□ 0.01
GPM6A-221ENST00000515090 DNAJC5Q9H3Z4 198 aa15.11■□□□□ 0.01
GPM6A-221ENST00000515090 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
GPM6A-221ENST00000515090 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
GPM6A-221ENST00000515090 CAPN15O75808 1086 aa15.07■□□□□ 0
GPM6A-221ENST00000515090 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
GPM6A-221ENST00000515090 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
GPM6A-221ENST00000515090 THOC2Q8NI27 1593 aaKnown RBP15.05■□□□□ -0
GPM6A-221ENST00000515090 DSG3P32926 999 aa15.04■□□□□ -0
GPM6A-221ENST00000515090 CADPSQ9ULU8 1353 aa15.02■□□□□ -0
GPM6A-221ENST00000515090 PDS5BQ9NTI5 1447 aa14.98□□□□□ -0.01
GPM6A-221ENST00000515090 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
GPM6A-221ENST00000515090 CFTRP13569 1480 aa14.87□□□□□ -0.03
GPM6A-221ENST00000515090 MRC2Q9UBG0 1479 aa14.87□□□□□ -0.03
GPM6A-221ENST00000515090 FANCD2Q9BXW9 1451 aa14.86□□□□□ -0.03
GPM6A-221ENST00000515090 KCNA4P22459 653 aa14.85□□□□□ -0.03
GPM6A-221ENST00000515090 WDR62O43379 1518 aa14.83□□□□□ -0.03
GPM6A-221ENST00000515090 CCDC88BA6NC98 1476 aa14.83□□□□□ -0.04
GPM6A-221ENST00000515090 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
GPM6A-221ENST00000515090 APLP2Q06481 763 aa14.81□□□□□ -0.04
GPM6A-221ENST00000515090 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
GPM6A-221ENST00000515090 URB2Q14146 1524 aaKnown RBP14.78□□□□□ -0.04
GPM6A-221ENST00000515090 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
GPM6A-221ENST00000515090 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
GPM6A-221ENST00000515090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.69□□□□□ -0.06
GPM6A-221ENST00000515090 HNRNPUL2Q1KMD3 747 aaKnown RBP14.69□□□□□ -0.06
GPM6A-221ENST00000515090 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
GPM6A-221ENST00000515090 ABCB7O75027 752 aa14.66□□□□□ -0.06
GPM6A-221ENST00000515090 TOPBP1Q92547 1522 aa14.6□□□□□ -0.07
GPM6A-221ENST00000515090 ZNF608Q9ULD9 1512 aaPredicted RBP14.6□□□□□ -0.07
GPM6A-221ENST00000515090 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
GPM6A-221ENST00000515090 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
GPM6A-221ENST00000515090 TRIM41Q8WV44 630 aa14.52□□□□□ -0.08
GPM6A-221ENST00000515090 IFT140Q96RY7 1462 aa14.52□□□□□ -0.09
GPM6A-221ENST00000515090 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
GPM6A-221ENST00000515090 DNMBPQ6XZF7 1577 aa14.51□□□□□ -0.09
GPM6A-221ENST00000515090 AQRO60306 1485 aaKnown RBP eCLIP14.48□□□□□ -0.09
GPM6A-221ENST00000515090 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
GPM6A-221ENST00000515090 RAD54L2Q9Y4B4 1467 aa14.48□□□□□ -0.09
GPM6A-221ENST00000515090 ABCC8Q09428 1581 aa14.46□□□□□ -0.09
GPM6A-221ENST00000515090 POLA1P09884 1462 aaPredicted RBP14.46□□□□□ -0.09
GPM6A-221ENST00000515090 EIF4G3O43432 1585 aaKnown RBP14.45□□□□□ -0.1
GPM6A-221ENST00000515090 CUX1P39880 1505 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms