Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
BRPF1P55201 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC9.45□□□□□ -0.9
BRPF1P55201 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
BRPF1P55201 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC9.44□□□□□ -0.9
BRPF1P55201 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC9.44□□□□□ -0.9
BRPF1P55201 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC9.44□□□□□ -0.9
BRPF1P55201 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC9.44□□□□□ -0.9
BRPF1P55201 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
BRPF1P55201 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
BRPF1P55201 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 RNU6-666P-201ENST00000363499 107 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC9.44□□□□□ -0.9
BRPF1P55201 AL390774.1-201ENST00000411924 246 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC9.44□□□□□ -0.9
BRPF1P55201 AL390840.1-201ENST00000420303 988 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 RPL24P2-201ENST00000421023 475 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC9.44□□□□□ -0.9
BRPF1P55201 USP9YP31-201ENST00000431405 881 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 AC245047.1-201ENST00000433276 873 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AC234064.1-201ENST00000436312 247 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AL353706.1-201ENST00000436728 494 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC9.44□□□□□ -0.9
BRPF1P55201 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 MTCYBP3-201ENST00000445588 1137 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
BRPF1P55201 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 AC116353.3-201ENST00000511215 249 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 MTCO2P32-201ENST00000514865 403 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC9.44□□□□□ -0.9
BRPF1P55201 AC090115.2-201ENST00000548060 883 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 HNRNPCP1-201ENST00000556181 766 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 HMGN1P26-201ENST00000558737 303 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC9.44□□□□□ -0.9
BRPF1P55201 AC024614.1-201ENST00000577546 307 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 AC004223.4-201ENST00000612426 332 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AC005332.10-201ENST00000612725 619 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 FAM27E3-202ENST00000614611 340 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC9.44□□□□□ -0.9
BRPF1P55201 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
BRPF1P55201 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 NCLP2-201ENST00000416078 1462 ntBASIC9.44□□□□□ -0.9
BRPF1P55201 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
BRPF1P55201 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
BRPF1P55201 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
BRPF1P55201 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC9.43□□□□□ -0.9
BRPF1P55201 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
BRPF1P55201 HCG18-244ENST00000602516 2890 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
BRPF1P55201 AC006116.1-201ENST00000587908 2171 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC9.43□□□□□ -0.9
BRPF1P55201 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.43□□□□□ -0.9
BRPF1P55201 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
BRPF1P55201 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
BRPF1P55201 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
BRPF1P55201 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
BRPF1P55201 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
BRPF1P55201 CASC19-205ENST00000641013 1411 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 CASC19-206ENST00000641028 1430 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
BRPF1P55201 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC9.43□□□□□ -0.9
BRPF1P55201 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
BRPF1P55201 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC9.43□□□□□ -0.9
BRPF1P55201 AC090114.1-201ENST00000393266 448 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 RPL24P7-201ENST00000399435 453 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 MTCO3P41-201ENST00000414801 328 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 TCEA1P4-201ENST00000415066 844 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 OFD1P11Y-201ENST00000418213 1177 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC9.43□□□□□ -0.9
BRPF1P55201 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC9.43□□□□□ -0.9
BRPF1P55201 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC9.43□□□□□ -0.9
BRPF1P55201 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC9.43□□□□□ -0.9
BRPF1P55201 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC9.43□□□□□ -0.9
BRPF1P55201 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC9.43□□□□□ -0.9
BRPF1P55201 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC9.43□□□□□ -0.9
BRPF1P55201 RPL23P10-201ENST00000468780 412 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 AF305872.1-201ENST00000485217 471 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 RN7SL569P-201ENST00000494652 288 ntBASIC9.43□□□□□ -0.9
BRPF1P55201 AC011352.1-201ENST00000512300 793 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms