RNA–Protein interactions for RNA: ENST00000519844.1

AP003472.1-201, humanhuman

TSL 3 BASIC

Gene AP003472.1, Length 644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003472.1-201ENST00000519844 AEBP2Q6ZN18 517 aaPredicted RBP25.93■■□□□ 1.74
AP003472.1-201ENST00000519844 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
AP003472.1-201ENST00000519844 SENP3Q9H4L4 574 aaPredicted RBP21.95■■□□□ 1.1
AP003472.1-201ENST00000519844 PHF23Q9BUL5 403 aaPredicted RBP21.9■■□□□ 1.1
AP003472.1-201ENST00000519844 FOXD1Q16676 465 aa20.49■□□□□ 0.87
AP003472.1-201ENST00000519844 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
AP003472.1-201ENST00000519844 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
AP003472.1-201ENST00000519844 ADRA2BP18089 450 aa19.42■□□□□ 0.7
AP003472.1-201ENST00000519844 PIAS4Q8N2W9 510 aaPredicted RBP19.24■□□□□ 0.67
AP003472.1-201ENST00000519844 MSH5O43196 834 aa18.95■□□□□ 0.62
AP003472.1-201ENST00000519844 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
AP003472.1-201ENST00000519844 MAPK8IP2Q13387 824 aaPredicted RBP17.75■□□□□ 0.43
AP003472.1-201ENST00000519844 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
AP003472.1-201ENST00000519844 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
AP003472.1-201ENST00000519844 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
AP003472.1-201ENST00000519844 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
AP003472.1-201ENST00000519844 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
AP003472.1-201ENST00000519844 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
AP003472.1-201ENST00000519844 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
AP003472.1-201ENST00000519844 KCNA4P22459 653 aa16.84■□□□□ 0.29
AP003472.1-201ENST00000519844 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
AP003472.1-201ENST00000519844 NPM3O75607 178 aaKnown RBP16.82■□□□□ 0.28
AP003472.1-201ENST00000519844 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
AP003472.1-201ENST00000519844 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
AP003472.1-201ENST00000519844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.18
AP003472.1-201ENST00000519844 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
AP003472.1-201ENST00000519844 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
AP003472.1-201ENST00000519844 C1QBPQ07021 282 aaKnown RBP15.97■□□□□ 0.15
AP003472.1-201ENST00000519844 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
AP003472.1-201ENST00000519844 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
AP003472.1-201ENST00000519844 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
AP003472.1-201ENST00000519844 CAPN15O75808 1086 aa15.54■□□□□ 0.08
AP003472.1-201ENST00000519844 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
AP003472.1-201ENST00000519844 ZBTB22O15209 634 aa15.53■□□□□ 0.08
AP003472.1-201ENST00000519844 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
AP003472.1-201ENST00000519844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
AP003472.1-201ENST00000519844 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
AP003472.1-201ENST00000519844 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
AP003472.1-201ENST00000519844 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
AP003472.1-201ENST00000519844 APLP2Q06481 763 aa15.36■□□□□ 0.05
AP003472.1-201ENST00000519844 DSG3P32926 999 aa15.35■□□□□ 0.05
AP003472.1-201ENST00000519844 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
AP003472.1-201ENST00000519844 ABCB7O75027 752 aa15.28■□□□□ 0.04
AP003472.1-201ENST00000519844 ATF5Q9Y2D1 282 aaPredicted RBP15.23■□□□□ 0.03
AP003472.1-201ENST00000519844 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
AP003472.1-201ENST00000519844 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
AP003472.1-201ENST00000519844 POLA2Q14181 598 aa15.03■□□□□ -0
AP003472.1-201ENST00000519844 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
AP003472.1-201ENST00000519844 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
AP003472.1-201ENST00000519844 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
AP003472.1-201ENST00000519844 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
AP003472.1-201ENST00000519844 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
AP003472.1-201ENST00000519844 FBLN2P98095 1184 aa14.48□□□□□ -0.09
AP003472.1-201ENST00000519844 AKT1S1Q96B36 256 aa14.31□□□□□ -0.12
AP003472.1-201ENST00000519844 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
AP003472.1-201ENST00000519844 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
AP003472.1-201ENST00000519844 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
AP003472.1-201ENST00000519844 REM2Q8IYK8 340 aaPredicted RBP14.23□□□□□ -0.13
AP003472.1-201ENST00000519844 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
AP003472.1-201ENST00000519844 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
AP003472.1-201ENST00000519844 POTEHQ6S545 545 aa14.17□□□□□ -0.14
AP003472.1-201ENST00000519844 SSUH2Q9Y2M2 353 aa14.14□□□□□ -0.15
AP003472.1-201ENST00000519844 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
AP003472.1-201ENST00000519844 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
AP003472.1-201ENST00000519844 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
AP003472.1-201ENST00000519844 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
AP003472.1-201ENST00000519844 PIP4P2Q8N4L2 257 aa13.94□□□□□ -0.18
AP003472.1-201ENST00000519844 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
AP003472.1-201ENST00000519844 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.19
AP003472.1-201ENST00000519844 PRKAR2AP13861 404 aaKnown RBP13.74□□□□□ -0.21
AP003472.1-201ENST00000519844 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
AP003472.1-201ENST00000519844 CHADLQ6NUI6 762 aa13.72□□□□□ -0.21
AP003472.1-201ENST00000519844 FKBP8Q14318 412 aa13.66□□□□□ -0.22
AP003472.1-201ENST00000519844 PROM2Q8N271 834 aa13.65□□□□□ -0.22
AP003472.1-201ENST00000519844 STAG3Q9UJ98 1225 aa13.59□□□□□ -0.23
AP003472.1-201ENST00000519844 HAX1O00165 279 aa13.57□□□□□ -0.24
AP003472.1-201ENST00000519844 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
AP003472.1-201ENST00000519844 EVX2Q03828 476 aa13.5□□□□□ -0.25
AP003472.1-201ENST00000519844 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
AP003472.1-201ENST00000519844 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
AP003472.1-201ENST00000519844 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
AP003472.1-201ENST00000519844 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.28
AP003472.1-201ENST00000519844 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
AP003472.1-201ENST00000519844 MIER1Q8N108 512 aa13.26□□□□□ -0.29
AP003472.1-201ENST00000519844 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
AP003472.1-201ENST00000519844 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
AP003472.1-201ENST00000519844 ZRANB1Q9UGI0 708 aa13.19□□□□□ -0.3
AP003472.1-201ENST00000519844 GABBR2O75899 941 aa13.15□□□□□ -0.3
AP003472.1-201ENST00000519844 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
AP003472.1-201ENST00000519844 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
AP003472.1-201ENST00000519844 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
AP003472.1-201ENST00000519844 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
AP003472.1-201ENST00000519844 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
AP003472.1-201ENST00000519844 PHF12Q96QT6 1004 aa13.08□□□□□ -0.32
AP003472.1-201ENST00000519844 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
AP003472.1-201ENST00000519844 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
AP003472.1-201ENST00000519844 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
AP003472.1-201ENST00000519844 GALR2O43603 387 aaPredicted RBP12.99□□□□□ -0.33
AP003472.1-201ENST00000519844 NUBP1P53384 320 aa12.98□□□□□ -0.33
AP003472.1-201ENST00000519844 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms