RNA–Protein interactions for RNA: ENST00000367399.6

CRB1-202, Transcript of crumbs 1, cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene CRB1, Length 3,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB1-202ENST00000367399 NISCHQ9Y2I1 1504 aa14.3□□□□□ -0.12
CRB1-202ENST00000367399 HRCP23327 699 aa13.21□□□□□ -0.3
CRB1-202ENST00000367399 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
CRB1-202ENST00000367399 PCGF6Q9BYE7 350 aa12.94□□□□□ -0.34
CRB1-202ENST00000367399 SUPT5HO00267 1087 aaKnown RBP12.92□□□□□ -0.34
CRB1-202ENST00000367399 PPARGC1BQ86YN6 1023 aaKnown RBP12.88□□□□□ -0.35
CRB1-202ENST00000367399 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
CRB1-202ENST00000367399 CHIC1Q5VXU3 224 aa12.67□□□□□ -0.38
CRB1-202ENST00000367399 MYO15BQ96JP2 1530 aa12.62□□□□□ -0.39
CRB1-202ENST00000367399 MYT1Q01538 1121 aa12.59□□□□□ -0.39
CRB1-202ENST00000367399 ZEB1P37275 1124 aaPredicted RBP12.52□□□□□ -0.41
CRB1-202ENST00000367399 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
CRB1-202ENST00000367399 SCAF1Q9H7N4 1312 aaKnown RBP12.5□□□□□ -0.41
CRB1-202ENST00000367399 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
CRB1-202ENST00000367399 LOC105371045A0A1W2PR82 267 aa12.39□□□□□ -0.43
CRB1-202ENST00000367399 CCDC180Q9P1Z9 1646 aa12.31□□□□□ -0.44
CRB1-202ENST00000367399 ACIN1Q9UKV3 1341 aaKnown RBP12.24□□□□□ -0.45
CRB1-202ENST00000367399 CENPBP07199 599 aaPredicted RBP12.2□□□□□ -0.46
CRB1-202ENST00000367399 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
CRB1-202ENST00000367399 NEUROD1Q13562 356 aa12.16□□□□□ -0.46
CRB1-202ENST00000367399 GTF3C3Q9Y5Q9 886 aa12.16□□□□□ -0.46
CRB1-202ENST00000367399 ZCCHC6Q5VYS8 1495 aaKnown RBP12.16□□□□□ -0.46
CRB1-202ENST00000367399 DIEXFQ68CQ4 756 aaKnown RBP12.02□□□□□ -0.48
CRB1-202ENST00000367399 CCER1Q8TC90 406 aaPredicted RBP12.01□□□□□ -0.49
CRB1-202ENST00000367399 FAM9AQ8IZU1 332 aaPredicted RBP11.96□□□□□ -0.49
CRB1-202ENST00000367399 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
CRB1-202ENST00000367399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
CRB1-202ENST00000367399 EHMT2Q96KQ7 1210 aa11.92□□□□□ -0.5
CRB1-202ENST00000367399 YTHDC1Q96MU7 727 aaKnown RBP11.86□□□□□ -0.51
CRB1-202ENST00000367399 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
CRB1-202ENST00000367399 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
CRB1-202ENST00000367399 MIER1Q8N108 512 aa11.65□□□□□ -0.54
CRB1-202ENST00000367399 BCL11AQ9H165 835 aa11.61□□□□□ -0.55
CRB1-202ENST00000367399 ANP32EQ9BTT0 268 aa11.61□□□□□ -0.55
CRB1-202ENST00000367399 CLSPNQ9HAW4 1339 aa11.59□□□□□ -0.55
CRB1-202ENST00000367399 RSF1Q96T23 1441 aaPredicted RBP11.57□□□□□ -0.56
CRB1-202ENST00000367399 ABCC9O60706 1549 aa11.55□□□□□ -0.56
CRB1-202ENST00000367399 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
CRB1-202ENST00000367399 RB1CC1Q8TDY2 1594 aa11.48□□□□□ -0.57
CRB1-202ENST00000367399 TSHZ2Q9NRE2 1034 aa11.48□□□□□ -0.57
CRB1-202ENST00000367399 CSRNP3Q8WYN3 585 aa11.43□□□□□ -0.58
CRB1-202ENST00000367399 HNRNPUL2Q1KMD3 747 aaKnown RBP11.43□□□□□ -0.58
CRB1-202ENST00000367399 WRNQ14191 1432 aaPredicted RBP eCLIP11.42□□□□□ -0.58
CRB1-202ENST00000367399 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
CRB1-202ENST00000367399 CEP162Q5TB80 1403 aa11.37□□□□□ -0.59
CRB1-202ENST00000367399 BCANQ96GW7 911 aa11.33□□□□□ -0.6
CRB1-202ENST00000367399 SCRIBQ14160 1630 aa11.32□□□□□ -0.6
CRB1-202ENST00000367399 APLP2Q06481 763 aa11.31□□□□□ -0.6
CRB1-202ENST00000367399 TNIKQ9UKE5 1360 aa11.3□□□□□ -0.6
CRB1-202ENST00000367399 NEFLP07196 543 aa11.28□□□□□ -0.6
CRB1-202ENST00000367399 FKBP8Q14318 412 aa11.26□□□□□ -0.61
CRB1-202ENST00000367399 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
CRB1-202ENST00000367399 RBM19Q9Y4C8 960 aaKnown RBP11.24□□□□□ -0.61
CRB1-202ENST00000367399 CECR2Q9BXF3 1484 aa11.18□□□□□ -0.62
CRB1-202ENST00000367399 EEA1Q15075 1411 aa11.17□□□□□ -0.62
CRB1-202ENST00000367399 CCDC88BA6NC98 1476 aa11.17□□□□□ -0.62
CRB1-202ENST00000367399 MROH2BQ7Z745 1585 aa11.17□□□□□ -0.62
CRB1-202ENST00000367399 SOGA1O94964 1423 aa11.16□□□□□ -0.62
CRB1-202ENST00000367399 GOLGA3Q08378 1498 aa11.14□□□□□ -0.63
CRB1-202ENST00000367399 PRKCSHP14314 528 aaPredicted RBP11.13□□□□□ -0.63
CRB1-202ENST00000367399 ABCC8Q09428 1581 aa11.12□□□□□ -0.63
CRB1-202ENST00000367399 ITGAEP38570 1179 aa11.12□□□□□ -0.63
CRB1-202ENST00000367399 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
CRB1-202ENST00000367399 WIZO95785 1651 aa11.12□□□□□ -0.63
CRB1-202ENST00000367399 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
CRB1-202ENST00000367399 DHX57Q6P158 1386 aaKnown RBP11.09□□□□□ -0.63
CRB1-202ENST00000367399 RANGAP1P46060 587 aaPredicted RBP11.09□□□□□ -0.63
CRB1-202ENST00000367399 CLIP1P30622 1438 aa11.08□□□□□ -0.64
CRB1-202ENST00000367399 CDK11AQ9UQ88 783 aaPredicted RBP11.08□□□□□ -0.64
CRB1-202ENST00000367399 MSH5O43196 834 aa11.06□□□□□ -0.64
CRB1-202ENST00000367399 DDX10Q13206 875 aaKnown RBP11.05□□□□□ -0.64
CRB1-202ENST00000367399 VPS8Q8N3P4 1428 aa11.05□□□□□ -0.64
CRB1-202ENST00000367399 RUSC2Q8N2Y8 1516 aa11.05□□□□□ -0.64
CRB1-202ENST00000367399 FANCIQ9NVI1 1328 aa11.04□□□□□ -0.64
CRB1-202ENST00000367399 BAZ1AQ9NRL2 1556 aaPredicted RBP11.04□□□□□ -0.64
CRB1-202ENST00000367399 TRIM52Q96A61 297 aa11.04□□□□□ -0.64
CRB1-202ENST00000367399 EIF4G1Q04637 1599 aaKnown RBP11.03□□□□□ -0.64
CRB1-202ENST00000367399 CEP164Q9UPV0 1460 aa11.02□□□□□ -0.65
CRB1-202ENST00000367399 DEKP35659 375 aaKnown RBP11.01□□□□□ -0.65
CRB1-202ENST00000367399 ANP32CO43423 234 aa11□□□□□ -0.65
CRB1-202ENST00000367399 CCER2I3L3R5 266 aa10.96□□□□□ -0.65
CRB1-202ENST00000367399 TOP2AP11388 1531 aaKnown RBP10.93□□□□□ -0.66
CRB1-202ENST00000367399 IRX6P78412 446 aaPredicted RBP10.91□□□□□ -0.66
CRB1-202ENST00000367399 NBR1Q14596 966 aa10.89□□□□□ -0.67
CRB1-202ENST00000367399 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
CRB1-202ENST00000367399 KIF21BO75037 1637 aa10.88□□□□□ -0.67
CRB1-202ENST00000367399 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
CRB1-202ENST00000367399 HNRNPUQ00839 825 aaKnown RBP eCLIP10.88□□□□□ -0.67
CRB1-202ENST00000367399 RTL5Q5HYW3 569 aaPredicted RBP10.88□□□□□ -0.67
CRB1-202ENST00000367399 KANK4Q5T7N3 995 aaPredicted RBP10.88□□□□□ -0.67
CRB1-202ENST00000367399 NACADO15069 1562 aa10.88□□□□□ -0.67
CRB1-202ENST00000367399 SMARCA2P51531 1590 aa10.88□□□□□ -0.67
CRB1-202ENST00000367399 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
CRB1-202ENST00000367399 HIRIP3Q9BW71 556 aaPredicted RBP10.86□□□□□ -0.67
CRB1-202ENST00000367399 NOP58Q9Y2X3 529 aaKnown RBP10.86□□□□□ -0.67
CRB1-202ENST00000367399 PPP4R2Q9NY27 417 aa10.86□□□□□ -0.67
CRB1-202ENST00000367399 ERICH6BQ5W0A0 696 aa10.86□□□□□ -0.67
CRB1-202ENST00000367399 CCNB3Q8WWL7 1395 aa10.85□□□□□ -0.67
CRB1-202ENST00000367399 RAPGEF2Q9Y4G8 1499 aa10.84□□□□□ -0.67
CRB1-202ENST00000367399 SIN3AQ96ST3 1273 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms