Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 AC093827.2-201ENST00000512654 315 ntBASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SNX9Q9Y5X1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX9Q9Y5X1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 AP006587.1-201ENST00000534129 1502 ntBASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX9Q9Y5X1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNX9Q9Y5X1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SNX9Q9Y5X1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNX9Q9Y5X1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.14■□□□□ 0.97
SNX9Q9Y5X1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 AC008550.1-201ENST00000511500 884 ntBASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SNX9Q9Y5X1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms