Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 AL162377.1-201ENST00000618844 1793 ntBASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA6Q9Y5G7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA6Q9Y5G7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA6Q9Y5G7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA6Q9Y5G7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA6Q9Y5G7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHGA6Q9Y5G7 KRT17P2-201ENST00000300992 1314 ntBASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 AL512408.1-201ENST00000569378 2000 ntBASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 AC011484.1-201ENST00000377652 1995 ntBASIC19.01■□□□□ 0.63
PCDHGA6Q9Y5G7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 AL049637.2-201ENST00000641778 930 ntBASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms