Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
AP4S1Q9Y587 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.64■□□□□ 0.58
AP4S1Q9Y587 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP4S1Q9Y587 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
AP4S1Q9Y587 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4S1Q9Y587 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 AC009113.1-201ENST00000570267 2443 ntBASIC18.63■□□□□ 0.57
AP4S1Q9Y587 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 FAM21FP-204ENST00000608637 956 ntBASIC18.63■□□□□ 0.57
AP4S1Q9Y587 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.63■□□□□ 0.57
AP4S1Q9Y587 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 TSPY26P-201ENST00000476365 1326 ntBASIC18.62■□□□□ 0.57
AP4S1Q9Y587 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP4S1Q9Y587 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms