Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.44■■□□□ 1.18
TRIM17Q9Y577 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.44■■□□□ 1.18
TRIM17Q9Y577 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM17Q9Y577 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.44■■□□□ 1.18
TRIM17Q9Y577 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
TRIM17Q9Y577 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.44■■□□□ 1.18
TRIM17Q9Y577 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM17Q9Y577 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 C1orf229-201ENST00000623686 2258 ntBASIC22.43■■□□□ 1.18
TRIM17Q9Y577 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 AP000593.1-201ENST00000393668 712 ntBASIC22.43■■□□□ 1.18
TRIM17Q9Y577 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 YBX1P10-201ENST00000444752 975 ntBASIC22.43■■□□□ 1.18
TRIM17Q9Y577 ZNF444P1-201ENST00000559497 298 ntBASIC22.43■■□□□ 1.18
TRIM17Q9Y577 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 CR769767.2-201ENST00000622735 460 ntBASIC22.43■■□□□ 1.18
TRIM17Q9Y577 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM17Q9Y577 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 AC112907.2-201ENST00000448639 330 ntBASIC22.42■■□□□ 1.18
TRIM17Q9Y577 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 AL353719.1-201ENST00000566847 864 ntBASIC22.42■■□□□ 1.18
TRIM17Q9Y577 PRELID1P1-202ENST00000567272 903 ntBASIC22.42■■□□□ 1.18
TRIM17Q9Y577 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM17Q9Y577 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 KRT8P10-201ENST00000450021 1447 ntBASIC22.41■■□□□ 1.18
TRIM17Q9Y577 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 AC004870.1-201ENST00000315132 882 ntBASIC22.41■■□□□ 1.18
TRIM17Q9Y577 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 AC083849.1-201ENST00000615227 514 ntBASIC22.41■■□□□ 1.18
TRIM17Q9Y577 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM17Q9Y577 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 MIR3652-201ENST00000579335 131 ntBASIC22.4■■□□□ 1.18
TRIM17Q9Y577 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM17Q9Y577 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC22.39■■□□□ 1.18
TRIM17Q9Y577 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC22.39■■□□□ 1.18
TRIM17Q9Y577 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM17Q9Y577 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
TRIM17Q9Y577 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
TRIM17Q9Y577 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM17Q9Y577 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM17Q9Y577 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRIM17Q9Y577 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.39■■□□□ 1.17
TRIM17Q9Y577 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.39■■□□□ 1.17
TRIM17Q9Y577 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.39■■□□□ 1.17
TRIM17Q9Y577 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.39■■□□□ 1.17
TRIM17Q9Y577 AC092119.3-201ENST00000612618 583 ntBASIC22.39■■□□□ 1.17
TRIM17Q9Y577 AC004263.2-201ENST00000617183 678 ntBASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms