Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 MKRN4P-201ENST00000444706 1521 ntBASIC15.78■□□□□ 0.12
LSM4Q9Y4Z0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 AL512625.2-201ENST00000417533 625 ntBASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 AC007322.3-201ENST00000426526 701 ntBASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 FAM21FP-204ENST00000608637 956 ntBASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.77■□□□□ 0.12
LSM4Q9Y4Z0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.77■□□□□ 0.11
LSM4Q9Y4Z0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 AC093827.2-201ENST00000512654 315 ntBASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 RNA5SP413-201ENST00000516373 109 ntBASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.76■□□□□ 0.11
LSM4Q9Y4Z0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 KRT18P29-201ENST00000397031 1267 ntBASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.75■□□□□ 0.11
LSM4Q9Y4Z0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms