Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 SYT6-210ENST00000641643 1587 ntBASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 PBX2P1-201ENST00000493219 1291 ntBASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
LRCH1Q9Y2L9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 AC099791.2-201ENST00000605725 427 ntBASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 AC012313.1-201ENST00000593393 3059 ntBASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCH1Q9Y2L9 BX119927.1-201ENST00000636596 1552 ntBASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 AL138724.1-201ENST00000606771 1088 ntBASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRCH1Q9Y2L9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 AC055733.4-201ENST00000638462 1354 ntBASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRCH1Q9Y2L9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.58
LRCH1Q9Y2L9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LRCH1Q9Y2L9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.7■□□□□ 0.58
LRCH1Q9Y2L9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms