Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 AC011767.1-201ENST00000617410 1153 ntBASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.35■■□□□ 1.01
CAPN11Q9UMQ6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 LINC01465-201ENST00000408887 1940 ntBASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 CYP2T1P-201ENST00000432607 1285 ntBASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 KRT18P5-201ENST00000436075 1291 ntBASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 C2orf69P4-201ENST00000565394 541 ntBASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 AC069236.1-201ENST00000604339 616 ntBASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN11Q9UMQ6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 AC006015.1-201ENST00000429970 570 ntBASIC21.33■■□□□ 1.01
CAPN11Q9UMQ6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CAPN11Q9UMQ6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.33■■□□□ 1
CAPN11Q9UMQ6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CAPN11Q9UMQ6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CAPN11Q9UMQ6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.33■■□□□ 1
CAPN11Q9UMQ6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CAPN11Q9UMQ6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.31■■□□□ 1
CAPN11Q9UMQ6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.31■■□□□ 1
CAPN11Q9UMQ6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CAPN11Q9UMQ6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CAPN11Q9UMQ6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.31■■□□□ 1
CAPN11Q9UMQ6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms