Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 HLA-B-256ENST00000639848 1089 ntBASIC20.12■□□□□ 0.81
UBP1Q9NZI7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 PNMA6B-201ENST00000538162 1200 ntBASIC20.11■□□□□ 0.81
UBP1Q9NZI7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UBP1Q9NZI7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.1■□□□□ 0.81
UBP1Q9NZI7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 AC060766.5-201ENST00000590539 871 ntBASIC20.1■□□□□ 0.81
UBP1Q9NZI7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.1■□□□□ 0.81
UBP1Q9NZI7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
UBP1Q9NZI7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UBP1Q9NZI7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 AC009237.14-201ENST00000609975 1594 ntBASIC20.08■□□□□ 0.81
UBP1Q9NZI7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.08■□□□□ 0.81
UBP1Q9NZI7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms