Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 AC004408.2-201ENST00000623613 2777 ntBASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 AC026271.2-201ENST00000428091 497 ntBASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 RARRES2P6-201ENST00000567333 442 ntBASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
THUMPD1Q9NXG2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 MIR5787-201ENST00000611784 55 ntBASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 AC010980.2-201ENST00000587099 1412 ntBASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
THUMPD1Q9NXG2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 C2orf69P4-201ENST00000565394 541 ntBASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
THUMPD1Q9NXG2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
THUMPD1Q9NXG2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
THUMPD1Q9NXG2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms